Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state

Respiratory complex I is a proton-pumping oxidoreductase key to bioenergetic metabolism. Biochemical studies have found a divide in the behavior of complex I in metazoans that aligns with the evolutionary split between Protostomia and Deuterostomia. Complex I from Deuterostomia including mammals can...

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Main Authors: Abhilash Padavannil, Anjaneyulu Murari, Shauna-Kay Rhooms, Edward Owusu-Ansah, James A Letts
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2023-03-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/84415
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author Abhilash Padavannil
Anjaneyulu Murari
Shauna-Kay Rhooms
Edward Owusu-Ansah
James A Letts
author_facet Abhilash Padavannil
Anjaneyulu Murari
Shauna-Kay Rhooms
Edward Owusu-Ansah
James A Letts
author_sort Abhilash Padavannil
collection DOAJ
description Respiratory complex I is a proton-pumping oxidoreductase key to bioenergetic metabolism. Biochemical studies have found a divide in the behavior of complex I in metazoans that aligns with the evolutionary split between Protostomia and Deuterostomia. Complex I from Deuterostomia including mammals can adopt a biochemically defined off-pathway ‘deactive’ state, whereas complex I from Protostomia cannot. The presence of off-pathway states complicates the interpretation of structural results and has led to considerable mechanistic debate. Here, we report the structure of mitochondrial complex I from the thoracic muscles of the model protostome Drosophila melanogaster. We show that although D. melanogaster complex I (Dm-CI) does not have a NEM-sensitive deactive state, it does show slow activation kinetics indicative of an off-pathway resting state. The resting-state structure of Dm-CI from the thoracic muscle reveals multiple conformations. We identify a helix-locked state in which an N-terminal α-helix on the NDUFS4 subunit wedges between the peripheral and membrane arms. Comparison of the Dm-CI structure and conformational states to those observed in bacteria, yeast, and mammals provides insight into the roles of subunits across organisms, explains why the Dm-CI off-pathway resting state is NEM insensitive, and raises questions regarding current mechanistic models of complex I turnover.
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spelling doaj.art-aa79db567dd941b0920c1e43136c15722023-03-23T17:19:08ZengeLife Sciences Publications LtdeLife2050-084X2023-03-011210.7554/eLife.84415Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked stateAbhilash Padavannil0https://orcid.org/0000-0002-9949-6776Anjaneyulu Murari1https://orcid.org/0000-0002-7532-964XShauna-Kay Rhooms2Edward Owusu-Ansah3https://orcid.org/0000-0002-3451-1752James A Letts4https://orcid.org/0000-0002-9864-3586Department of Molecular and Cellular Biology, University of California, Davis, Davis, United StatesDepartment of Physiology and Cellular Biophysics, Columbia University Irving Medical Center, New York, United StatesDepartment of Physiology and Cellular Biophysics, Columbia University Irving Medical Center, New York, United StatesDepartment of Physiology and Cellular Biophysics, Columbia University Irving Medical Center, New York, United States; The Robert N. Butler Columbia Aging Center, Columbia University Irving Medical Center, New York, United StatesDepartment of Molecular and Cellular Biology, University of California, Davis, Davis, United StatesRespiratory complex I is a proton-pumping oxidoreductase key to bioenergetic metabolism. Biochemical studies have found a divide in the behavior of complex I in metazoans that aligns with the evolutionary split between Protostomia and Deuterostomia. Complex I from Deuterostomia including mammals can adopt a biochemically defined off-pathway ‘deactive’ state, whereas complex I from Protostomia cannot. The presence of off-pathway states complicates the interpretation of structural results and has led to considerable mechanistic debate. Here, we report the structure of mitochondrial complex I from the thoracic muscles of the model protostome Drosophila melanogaster. We show that although D. melanogaster complex I (Dm-CI) does not have a NEM-sensitive deactive state, it does show slow activation kinetics indicative of an off-pathway resting state. The resting-state structure of Dm-CI from the thoracic muscle reveals multiple conformations. We identify a helix-locked state in which an N-terminal α-helix on the NDUFS4 subunit wedges between the peripheral and membrane arms. Comparison of the Dm-CI structure and conformational states to those observed in bacteria, yeast, and mammals provides insight into the roles of subunits across organisms, explains why the Dm-CI off-pathway resting state is NEM insensitive, and raises questions regarding current mechanistic models of complex I turnover.https://elifesciences.org/articles/84415mitochondriacomplex Isingle particle cryoEMelectron transport chainrespiration
spellingShingle Abhilash Padavannil
Anjaneyulu Murari
Shauna-Kay Rhooms
Edward Owusu-Ansah
James A Letts
Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state
eLife
mitochondria
complex I
single particle cryoEM
electron transport chain
respiration
title Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state
title_full Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state
title_fullStr Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state
title_full_unstemmed Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state
title_short Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state
title_sort resting mitochondrial complex i from drosophila melanogaster adopts a helix locked state
topic mitochondria
complex I
single particle cryoEM
electron transport chain
respiration
url https://elifesciences.org/articles/84415
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AT shaunakayrhooms restingmitochondrialcomplexifromdrosophilamelanogasteradoptsahelixlockedstate
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