Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis

Voltage-dependent anion-selective channel (VDAC) allows the exchange of small metabolites and inorganic ions across the mitochondrial outer membrane. It is involved in complex interactions that regulate mitochondrial and cellular functioning. Many organisms have several VDAC paralogs that play disti...

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Main Authors: Andonis Karachitos, Wojciech Grabiński, Martyna Baranek, Hanna Kmita
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-12-01
Series:Frontiers in Physiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fphys.2021.750627/full
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author Andonis Karachitos
Wojciech Grabiński
Martyna Baranek
Hanna Kmita
author_facet Andonis Karachitos
Wojciech Grabiński
Martyna Baranek
Hanna Kmita
author_sort Andonis Karachitos
collection DOAJ
description Voltage-dependent anion-selective channel (VDAC) allows the exchange of small metabolites and inorganic ions across the mitochondrial outer membrane. It is involved in complex interactions that regulate mitochondrial and cellular functioning. Many organisms have several VDAC paralogs that play distinct but poorly understood roles in the life and death of cells. It is assumed that such a large diversity of VDAC-encoding genes might cause physiological plasticity to cope with abiotic and biotic stresses known to impact mitochondrial function. Moreover, cysteine residues in mammalian VDAC paralogs may contribute to the reduction–oxidation (redox) sensor function based on disulfide bond formation and elimination, resulting in redox-sensitive VDAC (rsVDAC). Therefore, we analyzed whether rsVDAC is possible when only one VDAC variant is present in mitochondria and whether all VDAC paralogs present in mitochondria could be rsVDAC, using representatives of currently available VDAC amino acid sequences. The obtained results indicate that rsVDAC can occur when only one VDAC variant is present in mitochondria; however, the possibility of all VDAC paralogs in mitochondria being rsVDAC is very low. Moreover, the presence of rsVDAC may correlate with habitat conditions as rsVDAC appears to be prevalent in parasites. Thus, the channel may mediate detection and adaptation to environmental conditions.
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spelling doaj.art-aaddb4b67163458caf24749073dcc8222022-12-21T21:43:19ZengFrontiers Media S.A.Frontiers in Physiology1664-042X2021-12-011210.3389/fphys.2021.750627750627Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic AnalysisAndonis KarachitosWojciech GrabińskiMartyna BaranekHanna KmitaVoltage-dependent anion-selective channel (VDAC) allows the exchange of small metabolites and inorganic ions across the mitochondrial outer membrane. It is involved in complex interactions that regulate mitochondrial and cellular functioning. Many organisms have several VDAC paralogs that play distinct but poorly understood roles in the life and death of cells. It is assumed that such a large diversity of VDAC-encoding genes might cause physiological plasticity to cope with abiotic and biotic stresses known to impact mitochondrial function. Moreover, cysteine residues in mammalian VDAC paralogs may contribute to the reduction–oxidation (redox) sensor function based on disulfide bond formation and elimination, resulting in redox-sensitive VDAC (rsVDAC). Therefore, we analyzed whether rsVDAC is possible when only one VDAC variant is present in mitochondria and whether all VDAC paralogs present in mitochondria could be rsVDAC, using representatives of currently available VDAC amino acid sequences. The obtained results indicate that rsVDAC can occur when only one VDAC variant is present in mitochondria; however, the possibility of all VDAC paralogs in mitochondria being rsVDAC is very low. Moreover, the presence of rsVDAC may correlate with habitat conditions as rsVDAC appears to be prevalent in parasites. Thus, the channel may mediate detection and adaptation to environmental conditions.https://www.frontiersin.org/articles/10.3389/fphys.2021.750627/fullVDACparasitecysteine oxidationredox sensorenvironmental stressspermatozoa
spellingShingle Andonis Karachitos
Wojciech Grabiński
Martyna Baranek
Hanna Kmita
Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis
Frontiers in Physiology
VDAC
parasite
cysteine oxidation
redox sensor
environmental stress
spermatozoa
title Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis
title_full Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis
title_fullStr Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis
title_full_unstemmed Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis
title_short Redox-Sensitive VDAC: A Possible Function as an Environmental Stress Sensor Revealed by Bioinformatic Analysis
title_sort redox sensitive vdac a possible function as an environmental stress sensor revealed by bioinformatic analysis
topic VDAC
parasite
cysteine oxidation
redox sensor
environmental stress
spermatozoa
url https://www.frontiersin.org/articles/10.3389/fphys.2021.750627/full
work_keys_str_mv AT andoniskarachitos redoxsensitivevdacapossiblefunctionasanenvironmentalstresssensorrevealedbybioinformaticanalysis
AT wojciechgrabinski redoxsensitivevdacapossiblefunctionasanenvironmentalstresssensorrevealedbybioinformaticanalysis
AT martynabaranek redoxsensitivevdacapossiblefunctionasanenvironmentalstresssensorrevealedbybioinformaticanalysis
AT hannakmita redoxsensitivevdacapossiblefunctionasanenvironmentalstresssensorrevealedbybioinformaticanalysis