A framework for real-time monitoring, analysis and adaptive sampling of viral amplicon nanopore sequencing

A framework for real-time monitoring, analysis and adaptive sampling of viral amplicon nanopore sequencing

The ongoing SARS-CoV-2 pandemic demonstrates the utility of real-time sequence analysis in monitoring and surveillance of pathogens. However, cost-effective sequencing requires that samples be PCR amplified and multiplexed via barcoding onto a single flow cell, resulting in challenges with maximisin...

詳細記述

書誌詳細
主要な著者: Rory Munro, Nadine Holmes, Christopher Moore, Matthew Carlile, Alexander Payne, John R. Tyson, Thomas Williams, Christopher Alder, Luke B. Snell, Gaia Nebbia, Roberto Santos, Matt Loose
フォーマット: 論文
言語:English
出版事項: Frontiers Media S.A. 2023-03-01
シリーズ:Frontiers in Genetics
主題:
bioinformactics
software
pipeline
viral sequence analysis
genomics
nanopore sequencing
オンライン･アクセス:https://www.frontiersin.org/articles/10.3389/fgene.2023.1138582/full

インターネット

https://www.frontiersin.org/articles/10.3389/fgene.2023.1138582/full

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