The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis
In this study, we obtained the complete plastid genome of Grateloupia filicina (Lamouroux) C. Agardh using the high-throughput sequencing method. It had circular mapping organization with the length of 195,990 bp and contained 265 genes including 195 protein-coding genes, three rRNA genes, one tmRNA...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1524279 |
| _version_ | 1797640632775213056 |
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| author | Jing Zhang Xianming Tang Wei Zhou Chen Tao Liu Yue Li |
| author_facet | Jing Zhang Xianming Tang Wei Zhou Chen Tao Liu Yue Li |
| author_sort | Jing Zhang |
| collection | DOAJ |
| description | In this study, we obtained the complete plastid genome of Grateloupia filicina (Lamouroux) C. Agardh using the high-throughput sequencing method. It had circular mapping organization with the length of 195,990 bp and contained 265 genes including 195 protein-coding genes, three rRNA genes, one tmRNA gene, 28 tRNA genes and 38 unidentified open reading frames (ORFs). Moreover, phylogenetic analysis revealed that G. filicina firstly clustered with Grateloupia taiwanensis. The complete plastid genome obtained in this work would be useful for further understanding the evolution of Grateloupia. |
| first_indexed | 2024-03-11T13:34:38Z |
| format | Article |
| id | doaj.art-ab4f2255d89e400ea0c5a1953d462b28 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:38Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-ab4f2255d89e400ea0c5a1953d462b282023-11-02T15:57:27ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-01321172117310.1080/23802359.2018.15242791524279The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysisJing Zhang0Xianming Tang1Wei Zhou Chen2Tao Liu3Yue Li4Qilu University of Technology (Shandong Academy of Sciences)Hainan Academy of Ocean and Fisheries SciencesMarine Biology Institute, Shantou UniversityOcean University of ChinaWuXi NextCODEIn this study, we obtained the complete plastid genome of Grateloupia filicina (Lamouroux) C. Agardh using the high-throughput sequencing method. It had circular mapping organization with the length of 195,990 bp and contained 265 genes including 195 protein-coding genes, three rRNA genes, one tmRNA gene, 28 tRNA genes and 38 unidentified open reading frames (ORFs). Moreover, phylogenetic analysis revealed that G. filicina firstly clustered with Grateloupia taiwanensis. The complete plastid genome obtained in this work would be useful for further understanding the evolution of Grateloupia.http://dx.doi.org/10.1080/23802359.2018.1524279grateloupia filicinaplastid genomephylogenetic analysis |
| spellingShingle | Jing Zhang Xianming Tang Wei Zhou Chen Tao Liu Yue Li The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis Mitochondrial DNA. Part B. Resources grateloupia filicina plastid genome phylogenetic analysis |
| title | The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis |
| title_full | The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis |
| title_fullStr | The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis |
| title_full_unstemmed | The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis |
| title_short | The complete plastid genome of Grateloupia filicina (Rhodophyta) and phylogenetic analysis |
| title_sort | complete plastid genome of grateloupia filicina rhodophyta and phylogenetic analysis |
| topic | grateloupia filicina plastid genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2018.1524279 |
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