Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning
Abstract Cancer is one of the major causes of death in the modern world, and the incidence varies considerably based on race, ethnicity, and region. Novel cancer treatments, such as surgery and immunotherapy, are ineffective and expensive. In this situation, ion channels responsible for cell migrati...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Nature Portfolio
2023-12-01
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| Series: | Scientific Reports |
| Online Access: | https://doi.org/10.1038/s41598-023-49363-z |
| _version_ | 1797388362231840768 |
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| author | Huzaifa Umar Maryam Rabiu Aliyu Abdullahi Garba Usman Umar Muhammad Ghali Sani Isah Abba Dilber Uzun Ozsahin |
| author_facet | Huzaifa Umar Maryam Rabiu Aliyu Abdullahi Garba Usman Umar Muhammad Ghali Sani Isah Abba Dilber Uzun Ozsahin |
| author_sort | Huzaifa Umar |
| collection | DOAJ |
| description | Abstract Cancer is one of the major causes of death in the modern world, and the incidence varies considerably based on race, ethnicity, and region. Novel cancer treatments, such as surgery and immunotherapy, are ineffective and expensive. In this situation, ion channels responsible for cell migration have appeared to be the most promising targets for cancer treatment. This research presents findings on the organic compounds present in Albizia lebbeck ethanolic extracts (ALEE), as well as their impact on the anti-migratory, anti-proliferative and cytotoxic potentials on MDA-MB 231 and MCF-7 human breast cancer cell lines. In addition, artificial intelligence (AI) based models, multilayer perceptron (MLP), extreme gradient boosting (XGB), and extreme learning machine (ELM) were performed to predict in vitro cancer cell migration on both cell lines, based on our experimental data. The organic compounds composition of the ALEE was studied using gas chromatography-mass spectrometry (GC–MS) analysis. Cytotoxicity, anti-proliferations, and anti-migratory activity of the extract using Tryphan Blue, MTT, and Wound Heal assay, respectively. Among the various concentrations (2.5–200 μg/mL) of the ALEE that were used in our study, 2.5–10 μg/mL revealed anti-migratory potential with increased concentrations, and they did not show any effect on the proliferation of the cells (P < 0.05; n ≥ 3). Furthermore, the three data-driven models, Multi-layer perceptron (MLP), Extreme gradient boosting (XGB), and Extreme learning machine (ELM), predict the potential migration ability of the extract on the treated cells based on our experimental data. Overall, the concentrations of the plant extract that do not affect the proliferation of the type cells used demonstrated promising effects in reducing cell migration. XGB outperformed the MLP and ELM models and increased their performance efficiency by up to 3% and 1% for MCF and 1% and 2% for MDA-MB231, respectively, in the testing phase. |
| first_indexed | 2024-03-08T22:39:41Z |
| format | Article |
| id | doaj.art-ab78de814b5c43888b9d31efd22a01a4 |
| institution | Directory Open Access Journal |
| issn | 2045-2322 |
| language | English |
| last_indexed | 2024-03-08T22:39:41Z |
| publishDate | 2023-12-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Scientific Reports |
| spelling | doaj.art-ab78de814b5c43888b9d31efd22a01a42023-12-17T12:15:42ZengNature PortfolioScientific Reports2045-23222023-12-0113111610.1038/s41598-023-49363-zPrediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learningHuzaifa Umar0Maryam Rabiu Aliyu1Abdullahi Garba Usman2Umar Muhammad Ghali3Sani Isah Abba4Dilber Uzun Ozsahin5Near East University, Operational Research Centre in HealthcareDepartment of Energy System Engineering, Cyprus International UniversityNear East University, Operational Research Centre in HealthcareDepartment of Chemistry, Faculty of Natural and Applied Sciences, Firat UniversityInterdisciplinary Research Centre for Membranes and Water Security, King Fahd University of Petroleum and MineralsDepartment of Medical Diagnostic Imaging, College of Health Sciences, University of SharjahAbstract Cancer is one of the major causes of death in the modern world, and the incidence varies considerably based on race, ethnicity, and region. Novel cancer treatments, such as surgery and immunotherapy, are ineffective and expensive. In this situation, ion channels responsible for cell migration have appeared to be the most promising targets for cancer treatment. This research presents findings on the organic compounds present in Albizia lebbeck ethanolic extracts (ALEE), as well as their impact on the anti-migratory, anti-proliferative and cytotoxic potentials on MDA-MB 231 and MCF-7 human breast cancer cell lines. In addition, artificial intelligence (AI) based models, multilayer perceptron (MLP), extreme gradient boosting (XGB), and extreme learning machine (ELM) were performed to predict in vitro cancer cell migration on both cell lines, based on our experimental data. The organic compounds composition of the ALEE was studied using gas chromatography-mass spectrometry (GC–MS) analysis. Cytotoxicity, anti-proliferations, and anti-migratory activity of the extract using Tryphan Blue, MTT, and Wound Heal assay, respectively. Among the various concentrations (2.5–200 μg/mL) of the ALEE that were used in our study, 2.5–10 μg/mL revealed anti-migratory potential with increased concentrations, and they did not show any effect on the proliferation of the cells (P < 0.05; n ≥ 3). Furthermore, the three data-driven models, Multi-layer perceptron (MLP), Extreme gradient boosting (XGB), and Extreme learning machine (ELM), predict the potential migration ability of the extract on the treated cells based on our experimental data. Overall, the concentrations of the plant extract that do not affect the proliferation of the type cells used demonstrated promising effects in reducing cell migration. XGB outperformed the MLP and ELM models and increased their performance efficiency by up to 3% and 1% for MCF and 1% and 2% for MDA-MB231, respectively, in the testing phase.https://doi.org/10.1038/s41598-023-49363-z |
| spellingShingle | Huzaifa Umar Maryam Rabiu Aliyu Abdullahi Garba Usman Umar Muhammad Ghali Sani Isah Abba Dilber Uzun Ozsahin Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning Scientific Reports |
| title | Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning |
| title_full | Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning |
| title_fullStr | Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning |
| title_full_unstemmed | Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning |
| title_short | Prediction of cell migration potential on human breast cancer cells treated with Albizia lebbeck ethanolic extract using extreme machine learning |
| title_sort | prediction of cell migration potential on human breast cancer cells treated with albizia lebbeck ethanolic extract using extreme machine learning |
| url | https://doi.org/10.1038/s41598-023-49363-z |
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