MySSP: Non-stationary evolutionary sequence simulation, including indels
MySSP is a new program for the simulation of DNA sequence evolution across a phylogenetic tree. Although many programs are available for sequence simulation, MySSP is unique in its inclusion of indels, flexibility in allowing for non-stationary patterns, and output of ancestral sequences. Some of th...
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| Format: | Article |
| Language: | English |
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SAGE Publishing
2005-01-01
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| Series: | Evolutionary Bioinformatics |
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| Online Access: | http://la-press.com/article.php?article_id=185 |
| _version_ | 1818064795086094336 |
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| author | Michael S. Rosenberg |
| author_facet | Michael S. Rosenberg |
| author_sort | Michael S. Rosenberg |
| collection | DOAJ |
| description | MySSP is a new program for the simulation of DNA sequence evolution across a phylogenetic tree. Although many programs are available for sequence simulation, MySSP is unique in its inclusion of indels, flexibility in allowing for non-stationary patterns, and output of ancestral sequences. Some of these features can individually be found in existing programs, but have not all have been previously available in a single package. |
| first_indexed | 2024-12-10T14:41:40Z |
| format | Article |
| id | doaj.art-ac15e812b3d84fd496c2e9e94d429b45 |
| institution | Directory Open Access Journal |
| issn | 1176-9343 |
| language | English |
| last_indexed | 2024-12-10T14:41:40Z |
| publishDate | 2005-01-01 |
| publisher | SAGE Publishing |
| record_format | Article |
| series | Evolutionary Bioinformatics |
| spelling | doaj.art-ac15e812b3d84fd496c2e9e94d429b452022-12-22T01:44:41ZengSAGE PublishingEvolutionary Bioinformatics1176-93432005-01-0118183MySSP: Non-stationary evolutionary sequence simulation, including indelsMichael S. RosenbergMySSP is a new program for the simulation of DNA sequence evolution across a phylogenetic tree. Although many programs are available for sequence simulation, MySSP is unique in its inclusion of indels, flexibility in allowing for non-stationary patterns, and output of ancestral sequences. Some of these features can individually be found in existing programs, but have not all have been previously available in a single package.http://la-press.com/article.php?article_id=185Sequence SimulationDNAIndelsNon-stationarity |
| spellingShingle | Michael S. Rosenberg MySSP: Non-stationary evolutionary sequence simulation, including indels Evolutionary Bioinformatics Sequence Simulation DNA Indels Non-stationarity |
| title | MySSP: Non-stationary evolutionary sequence simulation, including indels |
| title_full | MySSP: Non-stationary evolutionary sequence simulation, including indels |
| title_fullStr | MySSP: Non-stationary evolutionary sequence simulation, including indels |
| title_full_unstemmed | MySSP: Non-stationary evolutionary sequence simulation, including indels |
| title_short | MySSP: Non-stationary evolutionary sequence simulation, including indels |
| title_sort | myssp non stationary evolutionary sequence simulation including indels |
| topic | Sequence Simulation DNA Indels Non-stationarity |
| url | http://la-press.com/article.php?article_id=185 |
| work_keys_str_mv | AT michaelsrosenberg mysspnonstationaryevolutionarysequencesimulationincludingindels |