Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness
Human anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced...
| Main Authors: | , , , , , , , , , , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Centers for Disease Control and Prevention
2020-02-01
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| Series: | Emerging Infectious Diseases |
| Subjects: | |
| Online Access: | https://wwwnc.cdc.gov/eid/article/26/2/19-1351_article |
| _version_ | 1811270815283412992 |
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| author | Heather P. McLaughlin Julia V. Bugrysheva Andrew B. Conley Christopher A. Gulvik Blake Cherney Cari B. Kolton Chung K. Marston Elke Saile Erin Swaney David Lonsway Amy S. Gargis Thiphasone Kongphet-Tran Christine Lascols Pierre Michel Julie Villanueva Alex R. Hoffmaster Jay E. Gee David Sue |
| author_facet | Heather P. McLaughlin Julia V. Bugrysheva Andrew B. Conley Christopher A. Gulvik Blake Cherney Cari B. Kolton Chung K. Marston Elke Saile Erin Swaney David Lonsway Amy S. Gargis Thiphasone Kongphet-Tran Christine Lascols Pierre Michel Julie Villanueva Alex R. Hoffmaster Jay E. Gee David Sue |
| author_sort | Heather P. McLaughlin |
| collection | DOAJ |
| description | Human anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced plasmid(s). Same-day genomic characterization enhances public health emergency response. |
| first_indexed | 2024-04-12T22:08:53Z |
| format | Article |
| id | doaj.art-ac2475ca9ed343f6be9c7ddc7aad2b58 |
| institution | Directory Open Access Journal |
| issn | 1080-6040 1080-6059 |
| language | English |
| last_indexed | 2024-04-12T22:08:53Z |
| publishDate | 2020-02-01 |
| publisher | Centers for Disease Control and Prevention |
| record_format | Article |
| series | Emerging Infectious Diseases |
| spelling | doaj.art-ac2475ca9ed343f6be9c7ddc7aad2b582022-12-22T03:14:49ZengCenters for Disease Control and PreventionEmerging Infectious Diseases1080-60401080-60592020-02-0126235836110.3201/eid2602.191351Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency PreparednessHeather P. McLaughlinJulia V. BugryshevaAndrew B. ConleyChristopher A. GulvikBlake CherneyCari B. KoltonChung K. MarstonElke SaileErin SwaneyDavid LonswayAmy S. GargisThiphasone Kongphet-TranChristine LascolsPierre MichelJulie VillanuevaAlex R. HoffmasterJay E. GeeDavid SueHuman anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced plasmid(s). Same-day genomic characterization enhances public health emergency response.https://wwwnc.cdc.gov/eid/article/26/2/19-1351_articleanthraxBacillus anthracisbacteriawhole-genome sequencingnanoporeemergency preparedness |
| spellingShingle | Heather P. McLaughlin Julia V. Bugrysheva Andrew B. Conley Christopher A. Gulvik Blake Cherney Cari B. Kolton Chung K. Marston Elke Saile Erin Swaney David Lonsway Amy S. Gargis Thiphasone Kongphet-Tran Christine Lascols Pierre Michel Julie Villanueva Alex R. Hoffmaster Jay E. Gee David Sue Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness Emerging Infectious Diseases anthrax Bacillus anthracis bacteria whole-genome sequencing nanopore emergency preparedness |
| title | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_full | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_fullStr | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_full_unstemmed | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_short | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_sort | rapid nanopore whole genome sequencing for anthrax emergency preparedness |
| topic | anthrax Bacillus anthracis bacteria whole-genome sequencing nanopore emergency preparedness |
| url | https://wwwnc.cdc.gov/eid/article/26/2/19-1351_article |
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