The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid
Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The c...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1840929 |
| _version_ | 1797639094776365056 |
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| author | Chu-Ran Li Yan Luo Ping Zhao Lu Li |
| author_facet | Chu-Ran Li Yan Luo Ping Zhao Lu Li |
| author_sort | Chu-Ran Li |
| collection | DOAJ |
| description | Pholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The cp genome was 160,114 bp in length with four typical quadripartite structures, which was consisted of a large single copy (LSC) region of 87,756 bp, a small single copy (SSC) region of 18,872 bp, and two inverted repeats (IR) of 26,734 bp. In addition, the cp genome encoded 132 genes in total, of which were 113 unique genes, including 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The phylogenetic analysis indicated that P. articulata was closely clustered with other two species of Pholidota and that they appeared to be related to Pleione in Arethuseae Lindl. |
| first_indexed | 2024-03-11T13:11:54Z |
| format | Article |
| id | doaj.art-ac380280037a4ef693513fabd74fd972 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:54Z |
| publishDate | 2020-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-ac380280037a4ef693513fabd74fd9722023-11-03T14:08:16ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-10-01543801380210.1080/23802359.2020.18409291840929The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchidChu-Ran Li0Yan Luo1Ping Zhao2Lu Li3Department of Biodiversity Conservation, Southwest Forestry UniversityDepartment of Gardening and Horticulture, Xishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesKey Laboratory of State Forestry and Grassland Administration on Highly-Efficient Utilization of Forestry Biomass Resources in Southwest China, Southwest Forestry UniversityDepartment of Biodiversity Conservation, Southwest Forestry UniversityPholidota Lindl. ex Hook. was placed in tribe Arethuseae Lindl. (Epidendroideae, Orchidaceae), while its generic relationship has been unclear. Since the plastid genome could play a key role in plant systematics, the complete chloroplast (cp) genome of P. articulata was reported in this paper. The cp genome was 160,114 bp in length with four typical quadripartite structures, which was consisted of a large single copy (LSC) region of 87,756 bp, a small single copy (SSC) region of 18,872 bp, and two inverted repeats (IR) of 26,734 bp. In addition, the cp genome encoded 132 genes in total, of which were 113 unique genes, including 79 protein-coding genes, 30 tRNAs, and 4 rRNAs. The phylogenetic analysis indicated that P. articulata was closely clustered with other two species of Pholidota and that they appeared to be related to Pleione in Arethuseae Lindl.http://dx.doi.org/10.1080/23802359.2020.1840929chloroplast genomeorchidaceae; pholidota articulataphylogenetic analysis |
| spellingShingle | Chu-Ran Li Yan Luo Ping Zhao Lu Li The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid Mitochondrial DNA. Part B. Resources chloroplast genome orchidaceae; pholidota articulata phylogenetic analysis |
| title | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
| title_full | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
| title_fullStr | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
| title_full_unstemmed | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
| title_short | The complete chloroplast genome sequence of Pholidota articulata (Orchidaceae), a rarely medicinal orchid |
| title_sort | complete chloroplast genome sequence of pholidota articulata orchidaceae a rarely medicinal orchid |
| topic | chloroplast genome orchidaceae; pholidota articulata phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1840929 |
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