Ribosome Rescue Pathways in Bacteria

Ribosomes that become stalled on truncated or damaged mRNAs during protein synthesis must be rescued for the cell to survive. Bacteria have evolved a diverse array of rescue pathways to remove the stalled ribosomes from the aberrant mRNA and return them to the free pool of actively translating ribos...

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Main Authors: Claudia Müller, Caillan Crowe-McAuliffe, Daniel N. Wilson
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.652980/full
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author Claudia Müller
Caillan Crowe-McAuliffe
Daniel N. Wilson
author_facet Claudia Müller
Caillan Crowe-McAuliffe
Daniel N. Wilson
author_sort Claudia Müller
collection DOAJ
description Ribosomes that become stalled on truncated or damaged mRNAs during protein synthesis must be rescued for the cell to survive. Bacteria have evolved a diverse array of rescue pathways to remove the stalled ribosomes from the aberrant mRNA and return them to the free pool of actively translating ribosomes. In addition, some of these pathways target the damaged mRNA and the incomplete nascent polypeptide chain for degradation. This review highlights the recent developments in our mechanistic understanding of bacterial ribosomal rescue systems, including drop-off, trans-translation mediated by transfer-messenger RNA and small protein B, ribosome rescue by the alternative rescue factors ArfA and ArfB, as well as Bacillus ribosome rescue factor A, an additional rescue system found in some Gram-positive bacteria, such as Bacillus subtilis. Finally, we discuss the recent findings of ribosome-associated quality control in particular bacterial lineages mediated by RqcH and RqcP. The importance of rescue pathways for bacterial survival suggests they may represent novel targets for the development of new antimicrobial agents against multi-drug resistant pathogenic bacteria.
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spelling doaj.art-ac4cd9f665cd4d58af16020c08a861752022-12-21T20:01:14ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2021-03-011210.3389/fmicb.2021.652980652980Ribosome Rescue Pathways in BacteriaClaudia MüllerCaillan Crowe-McAuliffeDaniel N. WilsonRibosomes that become stalled on truncated or damaged mRNAs during protein synthesis must be rescued for the cell to survive. Bacteria have evolved a diverse array of rescue pathways to remove the stalled ribosomes from the aberrant mRNA and return them to the free pool of actively translating ribosomes. In addition, some of these pathways target the damaged mRNA and the incomplete nascent polypeptide chain for degradation. This review highlights the recent developments in our mechanistic understanding of bacterial ribosomal rescue systems, including drop-off, trans-translation mediated by transfer-messenger RNA and small protein B, ribosome rescue by the alternative rescue factors ArfA and ArfB, as well as Bacillus ribosome rescue factor A, an additional rescue system found in some Gram-positive bacteria, such as Bacillus subtilis. Finally, we discuss the recent findings of ribosome-associated quality control in particular bacterial lineages mediated by RqcH and RqcP. The importance of rescue pathways for bacterial survival suggests they may represent novel targets for the development of new antimicrobial agents against multi-drug resistant pathogenic bacteria.https://www.frontiersin.org/articles/10.3389/fmicb.2021.652980/fullArfAArfBribosome rescueribosome-associated quality controlRqcHtmRNA
spellingShingle Claudia Müller
Caillan Crowe-McAuliffe
Daniel N. Wilson
Ribosome Rescue Pathways in Bacteria
Frontiers in Microbiology
ArfA
ArfB
ribosome rescue
ribosome-associated quality control
RqcH
tmRNA
title Ribosome Rescue Pathways in Bacteria
title_full Ribosome Rescue Pathways in Bacteria
title_fullStr Ribosome Rescue Pathways in Bacteria
title_full_unstemmed Ribosome Rescue Pathways in Bacteria
title_short Ribosome Rescue Pathways in Bacteria
title_sort ribosome rescue pathways in bacteria
topic ArfA
ArfB
ribosome rescue
ribosome-associated quality control
RqcH
tmRNA
url https://www.frontiersin.org/articles/10.3389/fmicb.2021.652980/full
work_keys_str_mv AT claudiamuller ribosomerescuepathwaysinbacteria
AT caillancrowemcauliffe ribosomerescuepathwaysinbacteria
AT danielnwilson ribosomerescuepathwaysinbacteria