In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)

Cadmium is a pollutant of concern and accumulates in soil from unchecked industrial activities like smelting, incinerations and combustion. Plants interact via different mechanisms with heavy metal pollutants in soil. Understanding of the plant-soil-metal interactions and the biomolecules involved i...

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Main Authors: Alla Singh, Chikkappa Karjagi, Ramesh Kumar, D P Chaudhary, Sujay Rakshit
Format: Article
Language:English
Published: Indian Council of Agricultural Research 2020-10-01
Series:The Indian Journal of Agricultural Sciences
Subjects:
Online Access:https://epubs.icar.org.in/index.php/IJAgS/article/view/106596
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author Alla Singh
Chikkappa Karjagi
Ramesh Kumar
D P Chaudhary
Sujay Rakshit
author_facet Alla Singh
Chikkappa Karjagi
Ramesh Kumar
D P Chaudhary
Sujay Rakshit
author_sort Alla Singh
collection DOAJ
description Cadmium is a pollutant of concern and accumulates in soil from unchecked industrial activities like smelting, incinerations and combustion. Plants interact via different mechanisms with heavy metal pollutants in soil. Understanding of the plant-soil-metal interactions and the biomolecules involved in this interaction is important to make informed choices for setting breeding goals. In Arabidopsis thaliana, AtOSA1 (A. thaliana oxidative stress-related Abc1-like protein) is involved in response to cadmium stress. The homologous sequences have been deciphered in maize (Zea mays L.). The structures of the maize proteins have been determined. It is observed that multiple proteins sense cadmium and can respond to its presence. Concerted action of all the proteins may be essential to realize full response against cadmium presence in soil and mitigation of plant growth inhibition. Better understanding of the response to cadmium stress would pave way for designing effective breeding strategies for pyramiding beneficial alleles in elite germplasm.
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spelling doaj.art-ac6a69138ed04b418a5c48ee7704e5672023-02-14T08:27:02ZengIndian Council of Agricultural ResearchThe Indian Journal of Agricultural Sciences0019-50222394-33192020-10-0190910.56093/ijas.v90i9.106596In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)Alla Singh0Chikkappa Karjagi1Ramesh Kumar2D P Chaudhary3Sujay Rakshit4ICAR-Indian Institute of Maize Research, PAU campus, Ludhiana, Punjab 141 004, IndiaICAR-Indian Institute of Maize Research, PAU campus, Ludhiana, Punjab 141 004, IndiaICAR-Indian Institute of Maize Research, PAU campus, Ludhiana, Punjab 141 004, IndiaICAR-Indian Institute of Maize Research, PAU campus, Ludhiana, Punjab 141 004, IndiaICAR-Indian Institute of Maize Research, PAU campus, Ludhiana, Punjab 141 004, IndiaCadmium is a pollutant of concern and accumulates in soil from unchecked industrial activities like smelting, incinerations and combustion. Plants interact via different mechanisms with heavy metal pollutants in soil. Understanding of the plant-soil-metal interactions and the biomolecules involved in this interaction is important to make informed choices for setting breeding goals. In Arabidopsis thaliana, AtOSA1 (A. thaliana oxidative stress-related Abc1-like protein) is involved in response to cadmium stress. The homologous sequences have been deciphered in maize (Zea mays L.). The structures of the maize proteins have been determined. It is observed that multiple proteins sense cadmium and can respond to its presence. Concerted action of all the proteins may be essential to realize full response against cadmium presence in soil and mitigation of plant growth inhibition. Better understanding of the response to cadmium stress would pave way for designing effective breeding strategies for pyramiding beneficial alleles in elite germplasm.https://epubs.icar.org.in/index.php/IJAgS/article/view/106596Abcl-like proteinsMaizeMetal stress responsePhytoremediation
spellingShingle Alla Singh
Chikkappa Karjagi
Ramesh Kumar
D P Chaudhary
Sujay Rakshit
In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)
The Indian Journal of Agricultural Sciences
Abcl-like proteins
Maize
Metal stress response
Phytoremediation
title In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)
title_full In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)
title_fullStr In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)
title_full_unstemmed In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)
title_short In-silico characterization of cadmium stress response-associated Abc1-like protein and its homologues in maize (Zea mays)
title_sort in silico characterization of cadmium stress response associated abc1 like protein and its homologues in maize zea mays
topic Abcl-like proteins
Maize
Metal stress response
Phytoremediation
url https://epubs.icar.org.in/index.php/IJAgS/article/view/106596
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AT chikkappakarjagi insilicocharacterizationofcadmiumstressresponseassociatedabc1likeproteinanditshomologuesinmaizezeamays
AT rameshkumar insilicocharacterizationofcadmiumstressresponseassociatedabc1likeproteinanditshomologuesinmaizezeamays
AT dpchaudhary insilicocharacterizationofcadmiumstressresponseassociatedabc1likeproteinanditshomologuesinmaizezeamays
AT sujayrakshit insilicocharacterizationofcadmiumstressresponseassociatedabc1likeproteinanditshomologuesinmaizezeamays