Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast
Priestia is a genus of biotechnologically important bacteria adapted to thrive in a wide range of environmental conditions including the marine sediments. Here, we screened and isolated a strain from the Bagamoyo marine mangrove-inhabited sediments and then employed whole genome sequencing to recove...
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| Format: | Article |
| Language: | English |
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Elsevier
2023-06-01
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| Series: | Data in Brief |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S235234092300238X |
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| author | Reuben S. Maghembe France P. Mdoe Abdalah Makaranga James A. Mpemba Deogratius Mark Clement Mlay Edward A. Moto Andrew G. Mtewa |
| author_facet | Reuben S. Maghembe France P. Mdoe Abdalah Makaranga James A. Mpemba Deogratius Mark Clement Mlay Edward A. Moto Andrew G. Mtewa |
| author_sort | Reuben S. Maghembe |
| collection | DOAJ |
| description | Priestia is a genus of biotechnologically important bacteria adapted to thrive in a wide range of environmental conditions including the marine sediments. Here, we screened and isolated a strain from the Bagamoyo marine mangrove-inhabited sediments and then employed whole genome sequencing to recover and define its full genome. De novo-assembly with Unicycler (v. 0.4.8) and annotation with Prokaryotic Genome Annotation Pipeline (PGAP) revealed that that its genome contains one chromosome (5,549,131 bp), with a GC content of 37.62%. Further analysis showed that the genome contains 5,687 coding sequences (CDS), 4 rRNAs, 84 tRNAs, 12 ncRNAs, and at least 2 plasmids (1,142 bp and 6,490 bp). On the other hand, antiSMASH-based secondary metabolite analysis revealed that the novel strain (MARUCO02) contains gene clusters for biosynthesis of MEP-DOXP-dependent versatile isoprenoids (eg. carotenoids), siderophores (synechobactin and schizokinen) and polyhydroxyalkanoates (PHA). The genome dataset also informs about the presence genes encoding enzymes required for generation of hopanoids, compounds that confer adaption to harsh environmental conditions including industrial cultivation recipes. Our data from this novel Priestia megaterium strain MARUCO02 can be used for reference and in genome-guided selection of strains for production of isoprenoids as well as industrially useful siderophores and polymers, amenable for biosynthetic manipulations in a biotechnological process. |
| first_indexed | 2024-03-13T03:58:20Z |
| format | Article |
| id | doaj.art-acf1e53ec22c4a69bfaa0b95a7305bf2 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-03-13T03:58:20Z |
| publishDate | 2023-06-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-acf1e53ec22c4a69bfaa0b95a7305bf22023-06-22T05:03:39ZengElsevierData in Brief2352-34092023-06-0148109119Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo CoastReuben S. Maghembe0France P. Mdoe1Abdalah Makaranga2James A. Mpemba3Deogratius Mark4Clement Mlay5Edward A. Moto6Andrew G. Mtewa7Biological and Marine Sciences, Faculty of Natural and Applied Sciences, Marian University College, P. O. Box 47, Bagamoyo, Tanzania; Department of Biological Sciences, Faculty of Science, University of Botswana, Private Bag 0704, Gaborone, Botswana; Corresponding author.Biological and Marine Sciences, Faculty of Natural and Applied Sciences, Marian University College, P. O. Box 47, Bagamoyo, TanzaniaBiological and Marine Sciences, Faculty of Natural and Applied Sciences, Marian University College, P. O. Box 47, Bagamoyo, TanzaniaDepartment of Biochemistry and Physiology, St Francis University College of Health and Allied Sciences, P.O.Box 175, Ifakara, TanzaniaTanzania Agricultural Research Institute, Mikocheni, P.O. Box 6226, Dar es Salaam, TanzaniaBiosciences Research Centre (PUBReC), Pwani University, KenyaDepartment of Biology, College of Natural & Mathematics Sciences, University of Dodoma, P.O Box 338, Dodoma, Tanzania.Chemistry Section, Department of Applied Sciences, Malawi Institute of Technology, Malawi University of Science & Technology, P.O. Box 5196, Limbe, MalawiPriestia is a genus of biotechnologically important bacteria adapted to thrive in a wide range of environmental conditions including the marine sediments. Here, we screened and isolated a strain from the Bagamoyo marine mangrove-inhabited sediments and then employed whole genome sequencing to recover and define its full genome. De novo-assembly with Unicycler (v. 0.4.8) and annotation with Prokaryotic Genome Annotation Pipeline (PGAP) revealed that that its genome contains one chromosome (5,549,131 bp), with a GC content of 37.62%. Further analysis showed that the genome contains 5,687 coding sequences (CDS), 4 rRNAs, 84 tRNAs, 12 ncRNAs, and at least 2 plasmids (1,142 bp and 6,490 bp). On the other hand, antiSMASH-based secondary metabolite analysis revealed that the novel strain (MARUCO02) contains gene clusters for biosynthesis of MEP-DOXP-dependent versatile isoprenoids (eg. carotenoids), siderophores (synechobactin and schizokinen) and polyhydroxyalkanoates (PHA). The genome dataset also informs about the presence genes encoding enzymes required for generation of hopanoids, compounds that confer adaption to harsh environmental conditions including industrial cultivation recipes. Our data from this novel Priestia megaterium strain MARUCO02 can be used for reference and in genome-guided selection of strains for production of isoprenoids as well as industrially useful siderophores and polymers, amenable for biosynthetic manipulations in a biotechnological process.http://www.sciencedirect.com/science/article/pii/S235234092300238XPriestia megateriumGenome sequencePhylogenomicsBiosynthetic gene clustersCarotenoidsPolyhydroxyalkanoates |
| spellingShingle | Reuben S. Maghembe France P. Mdoe Abdalah Makaranga James A. Mpemba Deogratius Mark Clement Mlay Edward A. Moto Andrew G. Mtewa Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast Data in Brief Priestia megaterium Genome sequence Phylogenomics Biosynthetic gene clusters Carotenoids Polyhydroxyalkanoates |
| title | Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast |
| title_full | Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast |
| title_fullStr | Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast |
| title_full_unstemmed | Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast |
| title_short | Complete genome sequence data of Priestia megaterium strain MARUCO02 isolated from marine mangrove-inhabited sediments of the Indian Ocean in the Bagamoyo Coast |
| title_sort | complete genome sequence data of priestia megaterium strain maruco02 isolated from marine mangrove inhabited sediments of the indian ocean in the bagamoyo coast |
| topic | Priestia megaterium Genome sequence Phylogenomics Biosynthetic gene clusters Carotenoids Polyhydroxyalkanoates |
| url | http://www.sciencedirect.com/science/article/pii/S235234092300238X |
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