Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
An evaluation of normalization methods shows that it is possible to combine microarray and RNA-seq data for machine learning applications.
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
Nature Portfolio
2023-02-01
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| Series: | Communications Biology |
| Online Access: | https://doi.org/10.1038/s42003-023-04588-6 |
| _version_ | 1797863826703515648 |
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| author | Steven M. Foltz Casey S. Greene Jaclyn N. Taroni |
| author_facet | Steven M. Foltz Casey S. Greene Jaclyn N. Taroni |
| author_sort | Steven M. Foltz |
| collection | DOAJ |
| description | An evaluation of normalization methods shows that it is possible to combine microarray and RNA-seq data for machine learning applications. |
| first_indexed | 2024-04-09T22:41:53Z |
| format | Article |
| id | doaj.art-ade4ec9e738148ab86a6427b611b0dbc |
| institution | Directory Open Access Journal |
| issn | 2399-3642 |
| language | English |
| last_indexed | 2024-04-09T22:41:53Z |
| publishDate | 2023-02-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Communications Biology |
| spelling | doaj.art-ade4ec9e738148ab86a6427b611b0dbc2023-03-22T12:05:54ZengNature PortfolioCommunications Biology2399-36422023-02-016111010.1038/s42003-023-04588-6Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneouslySteven M. Foltz0Casey S. Greene1Jaclyn N. Taroni2Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of PennsylvaniaDepartment of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of PennsylvaniaDepartment of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of PennsylvaniaAn evaluation of normalization methods shows that it is possible to combine microarray and RNA-seq data for machine learning applications.https://doi.org/10.1038/s42003-023-04588-6 |
| spellingShingle | Steven M. Foltz Casey S. Greene Jaclyn N. Taroni Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously Communications Biology |
| title | Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously |
| title_full | Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously |
| title_fullStr | Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously |
| title_full_unstemmed | Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously |
| title_short | Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously |
| title_sort | cross platform normalization enables machine learning model training on microarray and rna seq data simultaneously |
| url | https://doi.org/10.1038/s42003-023-04588-6 |
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