sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters

sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters

Abstract Background sgnesR (Stochastic Gene Network Expression Simulator in R) is an R package that provides an interface to simulate gene expression data from a given gene network using the stochastic simulation algorithm (SSA). The package allows various options for delay parameters and can easily...

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Bibliographic Details
Main Authors: Shailesh Tripathi, Jason Lloyd-Price, Andre Ribeiro, Olli Yli-Harja, Matthias Dehmer, Frank Emmert-Streib
Format: Article
Language:English
Published: BMC 2017-07-01
Series:BMC Bioinformatics
Subjects:
Gene expression data
Gene network
Simulation
Online Access:http://link.springer.com/article/10.1186/s12859-017-1731-8

Internet

http://link.springer.com/article/10.1186/s12859-017-1731-8

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