Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)
Hoya is a remarkable genus with high horticultural ornamental value. In this study, we report and characterize the complete plastid genome sequence of Hoya carnosa. The complete chloroplast genome was 176,340 bp in length, which includes a pair of inverted repeat regions (IRs) of 41,381 bp separated...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1710596 |
| _version_ | 1797639434637672448 |
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| author | Xue-Fen Wei Si-Jin Zeng Guo-Qiang Zhang Guang-Da Tang Jiu-Xiang Huang |
| author_facet | Xue-Fen Wei Si-Jin Zeng Guo-Qiang Zhang Guang-Da Tang Jiu-Xiang Huang |
| author_sort | Xue-Fen Wei |
| collection | DOAJ |
| description | Hoya is a remarkable genus with high horticultural ornamental value. In this study, we report and characterize the complete plastid genome sequence of Hoya carnosa. The complete chloroplast genome was 176,340 bp in length, which includes a pair of inverted repeat regions (IRs) of 41,381 bp separated by a large single copy region (LSC) 91,281 bp and a small single copy region (SSC) 2,297 bp. Interestingly, IRs expanded into SSC, with the result that most of the genes in SSC were duplicated. This chloroplast genome contained 110 genes, including 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The complete plastome sequence of H. carnosa will provide some useful information for future phylogenetic study of Hoya and its horticultural application. |
| first_indexed | 2024-03-11T13:17:50Z |
| format | Article |
| id | doaj.art-aeaf6ef84cfc46b2bd93bb4e506b0e9f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:50Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-aeaf6ef84cfc46b2bd93bb4e506b0e9f2023-11-03T11:00:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015152252310.1080/23802359.2019.17105961710596Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae)Xue-Fen Wei0Si-Jin Zeng1Guo-Qiang Zhang2Guang-Da Tang3Jiu-Xiang Huang4College of Forestry and Landscape Architecture, South China Limestone Plants Research Center, South China Agricultural UniversityCollege of Forestry and Landscape Architecture, South China Limestone Plants Research Center, South China Agricultural UniversityShenzhen Key Laboratory for Orchid Conservation and Utilization, The National Orchid Conservation Centre of China and The Orchid Conservation and Research Centre of ShenzhenCollege of Forestry and Landscape Architecture, South China Limestone Plants Research Center, South China Agricultural UniversityCollege of Forestry and Landscape Architecture, South China Limestone Plants Research Center, South China Agricultural UniversityHoya is a remarkable genus with high horticultural ornamental value. In this study, we report and characterize the complete plastid genome sequence of Hoya carnosa. The complete chloroplast genome was 176,340 bp in length, which includes a pair of inverted repeat regions (IRs) of 41,381 bp separated by a large single copy region (LSC) 91,281 bp and a small single copy region (SSC) 2,297 bp. Interestingly, IRs expanded into SSC, with the result that most of the genes in SSC were duplicated. This chloroplast genome contained 110 genes, including 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The complete plastome sequence of H. carnosa will provide some useful information for future phylogenetic study of Hoya and its horticultural application.http://dx.doi.org/10.1080/23802359.2019.1710596hoya carnosaplastome genomeapocynaceae |
| spellingShingle | Xue-Fen Wei Si-Jin Zeng Guo-Qiang Zhang Guang-Da Tang Jiu-Xiang Huang Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) Mitochondrial DNA. Part B. Resources hoya carnosa plastome genome apocynaceae |
| title | Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) |
| title_full | Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) |
| title_fullStr | Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) |
| title_full_unstemmed | Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) |
| title_short | Complete plastome sequence of Hoya carnosa (L. f.) R. Br. (Apocynaceae) |
| title_sort | complete plastome sequence of hoya carnosa l f r br apocynaceae |
| topic | hoya carnosa plastome genome apocynaceae |
| url | http://dx.doi.org/10.1080/23802359.2019.1710596 |
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