Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli
The data presented in this article shows the microarray based transcriptome profiles of ∆lon and ∆lon rpoB12 strains of Escherichia coli. The rif mutation namely, rpoB12 was isolated spontaneously in the background of ∆lon strain (over-produces colanic acid capsular polysaccharide) as a suppressor f...
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| Format: | Article |
| Language: | English |
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Elsevier
2018-12-01
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| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S235234091831237X |
| _version_ | 1828524714356637696 |
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| author | Shanmugaraja Meenakshi M. Hussain Munavar |
| author_facet | Shanmugaraja Meenakshi M. Hussain Munavar |
| author_sort | Shanmugaraja Meenakshi |
| collection | DOAJ |
| description | The data presented in this article shows the microarray based transcriptome profiles of ∆lon and ∆lon rpoB12 strains of Escherichia coli. The rif mutation namely, rpoB12 was isolated spontaneously in the background of ∆lon strain (over-produces colanic acid capsular polysaccharide) as a suppressor for over-production of colanic acid capsular polysaccharide (Meenakshi and Munavar, 2015) [1]. The E. coli strains were grown in LB medium at 30 °C overnight in duplicates. Total RNA from each samples were isolated and microarray based transcriptome profiles were studied and compared. The detailed methodology and data are given in this article. The interpretation of these data are discussed in the research article, “Evidence for Up and Down Regulation of 450 genes by rpoB12 (rif) Mutation and their Implications in Complexity of Transcription Modulation in Escherichia coli” (Meenakshi and Munavar, 2018) [2]. Keywords: ∆lon, rpoB12, Capsule, Biofilm, Motility, Stress response |
| first_indexed | 2024-12-11T20:52:52Z |
| format | Article |
| id | doaj.art-aedc6da3bea04a46ad53773baeaaac2d |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-12-11T20:52:52Z |
| publishDate | 2018-12-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-aedc6da3bea04a46ad53773baeaaac2d2022-12-22T00:51:11ZengElsevierData in Brief2352-34092018-12-0121582586Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coliShanmugaraja Meenakshi0M. Hussain Munavar1Department of Molecular Biology, School of Biological Sciences, Centre for Advanced Studies in Functional and Organismal Genomics, Madurai Kamaraj University [University with Potential for Excellence], Madurai 625021, IndiaCorrespondence to: Department of Molecular Biology, School of Biological Sciences, Madurai Kamaraj University, Palkalai Nagar, Madurai, Tamil Nadu 625021, India. Fax: +91-452-2458210.; Department of Molecular Biology, School of Biological Sciences, Centre for Advanced Studies in Functional and Organismal Genomics, Madurai Kamaraj University [University with Potential for Excellence], Madurai 625021, IndiaThe data presented in this article shows the microarray based transcriptome profiles of ∆lon and ∆lon rpoB12 strains of Escherichia coli. The rif mutation namely, rpoB12 was isolated spontaneously in the background of ∆lon strain (over-produces colanic acid capsular polysaccharide) as a suppressor for over-production of colanic acid capsular polysaccharide (Meenakshi and Munavar, 2015) [1]. The E. coli strains were grown in LB medium at 30 °C overnight in duplicates. Total RNA from each samples were isolated and microarray based transcriptome profiles were studied and compared. The detailed methodology and data are given in this article. The interpretation of these data are discussed in the research article, “Evidence for Up and Down Regulation of 450 genes by rpoB12 (rif) Mutation and their Implications in Complexity of Transcription Modulation in Escherichia coli” (Meenakshi and Munavar, 2018) [2]. Keywords: ∆lon, rpoB12, Capsule, Biofilm, Motility, Stress responsehttp://www.sciencedirect.com/science/article/pii/S235234091831237X |
| spellingShingle | Shanmugaraja Meenakshi M. Hussain Munavar Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli Data in Brief |
| title | Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli |
| title_full | Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli |
| title_fullStr | Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli |
| title_full_unstemmed | Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli |
| title_short | Microarray based transcriptome profile data of ∆lon and ∆lon rpoB12 strains of Escherichia coli |
| title_sort | microarray based transcriptome profile data of ∆lon and ∆lon rpob12 strains of escherichia coli |
| url | http://www.sciencedirect.com/science/article/pii/S235234091831237X |
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