Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer

The protein kinase Mps1 (monopolar spindle 1) is an important regulator of the Spindle Assembly Checkpoint (SAC), the evolutionary conserved checkpoint system of higher organisms that monitors the proper bipolar attachment of all chromosomes to the mitotic spindle during cell division. Defects in th...

Full description

Bibliographic Details
Main Authors: Lauren Pugh, Alisha Pancholi, Priscila Celeste Purat, Sandra Agudo-Alvarez, Raúl Benito-Arenas, Agatha Bastida, Victor M. Bolanos-Garcia
Format: Article
Language:English
Published: MDPI AG 2022-11-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/23/22/14228
_version_ 1797465046028124160
author Lauren Pugh
Alisha Pancholi
Priscila Celeste Purat
Sandra Agudo-Alvarez
Raúl Benito-Arenas
Agatha Bastida
Victor M. Bolanos-Garcia
author_facet Lauren Pugh
Alisha Pancholi
Priscila Celeste Purat
Sandra Agudo-Alvarez
Raúl Benito-Arenas
Agatha Bastida
Victor M. Bolanos-Garcia
author_sort Lauren Pugh
collection DOAJ
description The protein kinase Mps1 (monopolar spindle 1) is an important regulator of the Spindle Assembly Checkpoint (SAC), the evolutionary conserved checkpoint system of higher organisms that monitors the proper bipolar attachment of all chromosomes to the mitotic spindle during cell division. Defects in the catalytic activity and the transcription regulation of Mps1 are associated with genome instability, aneuploidy, and cancer. Moreover, multiple Mps1 missense and frameshift mutations have been reported in a wide range of types of cancer of different tissue origin. Due to these features, Mps1 arises as one promising drug target for cancer therapy. In this contribution, we developed a computational biology approach to study the dynamics of human Mps1 kinase interaction with isoflavones, a class of natural flavonoids, and compared their predicted mode of binding with that observed in the crystal structure of Mps1 in complex with reversine, a small-sized inhibitor of Mps1 and Aurora B kinases. We concluded that isoflavones define a chemical scaffold that can be used to develop new Mps1 inhibitors for the treatment of cancer associated with Mps1 amplification and aberrant chromosome segregation. In a broader context, the present report illustrates how modern chemoinformatics approaches can accelerate drug development in oncology.
first_indexed 2024-03-09T18:16:55Z
format Article
id doaj.art-aee9fb3a3d534e8bad7cc63009f20af5
institution Directory Open Access Journal
issn 1661-6596
1422-0067
language English
last_indexed 2024-03-09T18:16:55Z
publishDate 2022-11-01
publisher MDPI AG
record_format Article
series International Journal of Molecular Sciences
spelling doaj.art-aee9fb3a3d534e8bad7cc63009f20af52023-11-24T08:40:49ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672022-11-0123221422810.3390/ijms232214228Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of CancerLauren Pugh0Alisha Pancholi1Priscila Celeste Purat2Sandra Agudo-Alvarez3Raúl Benito-Arenas4Agatha Bastida5Victor M. Bolanos-Garcia6Department of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Gipsy Lane, Headington, Oxford OX3 0BP, UKDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Gipsy Lane, Headington, Oxford OX3 0BP, UKDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Gipsy Lane, Headington, Oxford OX3 0BP, UKDepartamento de Química Bio-Orgánica, IQOG, c/Juan de la Cierva 3, E-28006 Madrid, SpainDepartamento de Química Bio-Orgánica, IQOG, c/Juan de la Cierva 3, E-28006 Madrid, SpainDepartamento de Química Bio-Orgánica, IQOG, c/Juan de la Cierva 3, E-28006 Madrid, SpainDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Gipsy Lane, Headington, Oxford OX3 0BP, UKThe protein kinase Mps1 (monopolar spindle 1) is an important regulator of the Spindle Assembly Checkpoint (SAC), the evolutionary conserved checkpoint system of higher organisms that monitors the proper bipolar attachment of all chromosomes to the mitotic spindle during cell division. Defects in the catalytic activity and the transcription regulation of Mps1 are associated with genome instability, aneuploidy, and cancer. Moreover, multiple Mps1 missense and frameshift mutations have been reported in a wide range of types of cancer of different tissue origin. Due to these features, Mps1 arises as one promising drug target for cancer therapy. In this contribution, we developed a computational biology approach to study the dynamics of human Mps1 kinase interaction with isoflavones, a class of natural flavonoids, and compared their predicted mode of binding with that observed in the crystal structure of Mps1 in complex with reversine, a small-sized inhibitor of Mps1 and Aurora B kinases. We concluded that isoflavones define a chemical scaffold that can be used to develop new Mps1 inhibitors for the treatment of cancer associated with Mps1 amplification and aberrant chromosome segregation. In a broader context, the present report illustrates how modern chemoinformatics approaches can accelerate drug development in oncology.https://www.mdpi.com/1422-0067/23/22/14228Mps1cancerpoor prognosis tumoursflavonoid-like compoundsbioinformaticsmolecular docking
spellingShingle Lauren Pugh
Alisha Pancholi
Priscila Celeste Purat
Sandra Agudo-Alvarez
Raúl Benito-Arenas
Agatha Bastida
Victor M. Bolanos-Garcia
Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer
International Journal of Molecular Sciences
Mps1
cancer
poor prognosis tumours
flavonoid-like compounds
bioinformatics
molecular docking
title Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer
title_full Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer
title_fullStr Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer
title_full_unstemmed Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer
title_short Computational Biology Dynamics of Mps1 Kinase Molecular Interactions with Isoflavones Reveals a Chemical Scaffold with Potential to Develop New Therapeutics for the Treatment of Cancer
title_sort computational biology dynamics of mps1 kinase molecular interactions with isoflavones reveals a chemical scaffold with potential to develop new therapeutics for the treatment of cancer
topic Mps1
cancer
poor prognosis tumours
flavonoid-like compounds
bioinformatics
molecular docking
url https://www.mdpi.com/1422-0067/23/22/14228
work_keys_str_mv AT laurenpugh computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer
AT alishapancholi computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer
AT priscilacelestepurat computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer
AT sandraagudoalvarez computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer
AT raulbenitoarenas computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer
AT agathabastida computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer
AT victormbolanosgarcia computationalbiologydynamicsofmps1kinasemolecularinteractionswithisoflavonesrevealsachemicalscaffoldwithpotentialtodevelopnewtherapeuticsforthetreatmentofcancer