| Summary: | Dead wood is an important microsite for seedling regeneration in forest ecosystems. Although recent studies have found important associations between fungal wood decay type (white rot and brown rot) and both density and species composition of regenerating seedlings, its abiotic and biotic mechanisms are unknown. In the present study, pot experiments were conducted with the seedlings of two ectomycorrhizal tree species (<i>Abies veitchii</i> and <i>Betula ermanii</i>) and two arbuscular mycorrhizal tree species (<i>Chamaecyparis obtusa</i> and <i>Cryptomeria japonica</i>) to evaluate their growth using three substrates: brown rot wood, white rot wood, and soil. Results showed that the shoot growth of <i>B. ermanii</i> grown in white rot wood was greater than in other substrates, but this effect disappeared in sterilized substrates, suggesting some biotic positive effects occur in white rot wood. The seedling weights of <i>Cr. japonica</i> and <i>Ch. obtusa</i> were found to be greater in soil than in wood, and this may be partly attributable to the high mycorrhizal rate of their roots in soil. Colonization of arbuscular and ectomycorrhizal fungi was restricted to the seedlings in unsterilized soil. These results demonstrate the importance of the biological mechanisms affecting seedlings’ preferences for a variety of regeneration microsites and illustrate the need for future experiments to include larger sets of seedling species.
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