Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products

The use of live biotherapeutic products (LBPs), including single strains of beneficial probiotic bacteria or consortiums, is gaining traction as a viable option to treat inflammatory-mediated diseases like inflammatory bowel disease (IBD). However, LBPs’ persistence in the intestine is heterogeneous...

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Main Authors: Jiayu Ye, Lauren A. E. Erland, Sandeep K. Gill, Stephanie L. Bishop, Andrea Verdugo-Meza, Susan J. Murch, Deanna L. Gibson
Format: Article
Language:English
Published: MDPI AG 2021-05-01
Series:Biomolecules
Subjects:
Online Access:https://www.mdpi.com/2218-273X/11/5/738
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author Jiayu Ye
Lauren A. E. Erland
Sandeep K. Gill
Stephanie L. Bishop
Andrea Verdugo-Meza
Susan J. Murch
Deanna L. Gibson
author_facet Jiayu Ye
Lauren A. E. Erland
Sandeep K. Gill
Stephanie L. Bishop
Andrea Verdugo-Meza
Susan J. Murch
Deanna L. Gibson
author_sort Jiayu Ye
collection DOAJ
description The use of live biotherapeutic products (LBPs), including single strains of beneficial probiotic bacteria or consortiums, is gaining traction as a viable option to treat inflammatory-mediated diseases like inflammatory bowel disease (IBD). However, LBPs’ persistence in the intestine is heterogeneous since many beneficial bacteria lack mechanisms to tolerate the inflammation and the oxidative stress associated with IBD. We rationalized that optimizing LBPs with enhanced colonization and persistence in the inflamed intestine would help beneficial bacteria increase their bioavailability and sustain their beneficial responses. Our lab developed two bioengineered LBPs (SBT001/BioPersist and SBT002/BioColoniz) modified to enhance colonization or persistence in the inflamed intestine. In this study, we examined colon-derived metabolites via ultra-high performance liquid chromatography-mass spectrometry in colitic mice treated with either BioPersist or BioColoniz as compared to their unmodified parent strains (<i>Escherichia coli</i> Nissle 1917 [EcN] and <i>Lactobacillus reuteri</i>, respectively) or to each other. BioPersist administration resulted in lowered concentrations of inflammatory prostaglandins, decreased stress hormones such as adrenaline and corticosterone, increased serotonin, and decreased bile acid in comparison to EcN. In comparison to BioColoniz, BioPersist increased serotonin and antioxidant production, limited bile acid accumulation, and enhanced tissue restoration via activated purine and pyrimidine metabolism. These data generated several novel hypotheses for the beneficial roles that LBPs may play during colitis.
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spelling doaj.art-afecd45791b5419ba9315758fff3ff392023-11-21T19:55:04ZengMDPI AGBiomolecules2218-273X2021-05-0111573810.3390/biom11050738Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic ProductsJiayu Ye0Lauren A. E. Erland1Sandeep K. Gill2Stephanie L. Bishop3Andrea Verdugo-Meza4Susan J. Murch5Deanna L. Gibson6Department of Biology, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaDepartment of Chemistry, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaDepartment of Biology, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaDepartment of Chemistry, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaDepartment of Biology, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaDepartment of Chemistry, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaDepartment of Biology, University of British Columbia, Syilx Okanagan Nation Territory, Kelowna, BC V1V1V7, CanadaThe use of live biotherapeutic products (LBPs), including single strains of beneficial probiotic bacteria or consortiums, is gaining traction as a viable option to treat inflammatory-mediated diseases like inflammatory bowel disease (IBD). However, LBPs’ persistence in the intestine is heterogeneous since many beneficial bacteria lack mechanisms to tolerate the inflammation and the oxidative stress associated with IBD. We rationalized that optimizing LBPs with enhanced colonization and persistence in the inflamed intestine would help beneficial bacteria increase their bioavailability and sustain their beneficial responses. Our lab developed two bioengineered LBPs (SBT001/BioPersist and SBT002/BioColoniz) modified to enhance colonization or persistence in the inflamed intestine. In this study, we examined colon-derived metabolites via ultra-high performance liquid chromatography-mass spectrometry in colitic mice treated with either BioPersist or BioColoniz as compared to their unmodified parent strains (<i>Escherichia coli</i> Nissle 1917 [EcN] and <i>Lactobacillus reuteri</i>, respectively) or to each other. BioPersist administration resulted in lowered concentrations of inflammatory prostaglandins, decreased stress hormones such as adrenaline and corticosterone, increased serotonin, and decreased bile acid in comparison to EcN. In comparison to BioColoniz, BioPersist increased serotonin and antioxidant production, limited bile acid accumulation, and enhanced tissue restoration via activated purine and pyrimidine metabolism. These data generated several novel hypotheses for the beneficial roles that LBPs may play during colitis.https://www.mdpi.com/2218-273X/11/5/738live biotherapeuticsgut–liver–brain axisinflammatory bowel diseaseimmunometabolism
spellingShingle Jiayu Ye
Lauren A. E. Erland
Sandeep K. Gill
Stephanie L. Bishop
Andrea Verdugo-Meza
Susan J. Murch
Deanna L. Gibson
Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products
Biomolecules
live biotherapeutics
gut–liver–brain axis
inflammatory bowel disease
immunometabolism
title Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products
title_full Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products
title_fullStr Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products
title_full_unstemmed Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products
title_short Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products
title_sort metabolomics guided hypothesis generation for mechanisms of intestinal protection by live biotherapeutic products
topic live biotherapeutics
gut–liver–brain axis
inflammatory bowel disease
immunometabolism
url https://www.mdpi.com/2218-273X/11/5/738
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