The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis
Paris polyphylla var. alba is a medicinal plant commonly used in the southwest of China. This study characterized the complete chloroplast (cp) genome sequence of P. polyphylla var. alba to investigate its phylogenetic relationship in Melanthiaceae. The cp genome of P. polyphylla var. alba is 165,07...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1959450 |
| _version_ | 1797638820424843264 |
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| author | Yuan Jiang Qingshu Yang Jing Wang Jun Qian Baozhong Duan |
| author_facet | Yuan Jiang Qingshu Yang Jing Wang Jun Qian Baozhong Duan |
| author_sort | Yuan Jiang |
| collection | DOAJ |
| description | Paris polyphylla var. alba is a medicinal plant commonly used in the southwest of China. This study characterized the complete chloroplast (cp) genome sequence of P. polyphylla var. alba to investigate its phylogenetic relationship in Melanthiaceae. The cp genome of P. polyphylla var. alba is 165,079 base pairs (bp) in length with 36.96% G + C content. The cp genome is divided into (a) large single copy (LSC) (84,393 bp), (b) small single copy (SSC) (16,066 bp), and (c) two inverted regions (32,310 bp). The cp genome contains 135 genes, including 89 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicated that P. polyphylla var. alba is closest to P. polyphylla var. emeiensis, and Paris had a close relationship with Trillium in Melanthiaceae. |
| first_indexed | 2024-03-11T13:07:46Z |
| format | Article |
| id | doaj.art-b0377b489ebf43c797618cfd14334bc3 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:46Z |
| publishDate | 2021-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b0377b489ebf43c797618cfd14334bc32023-11-03T14:28:29ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-09-01692503250410.1080/23802359.2021.19594501959450The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysisYuan Jiang0Qingshu Yang1Jing Wang2Jun Qian3Baozhong Duan4College of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityParis polyphylla var. alba is a medicinal plant commonly used in the southwest of China. This study characterized the complete chloroplast (cp) genome sequence of P. polyphylla var. alba to investigate its phylogenetic relationship in Melanthiaceae. The cp genome of P. polyphylla var. alba is 165,079 base pairs (bp) in length with 36.96% G + C content. The cp genome is divided into (a) large single copy (LSC) (84,393 bp), (b) small single copy (SSC) (16,066 bp), and (c) two inverted regions (32,310 bp). The cp genome contains 135 genes, including 89 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicated that P. polyphylla var. alba is closest to P. polyphylla var. emeiensis, and Paris had a close relationship with Trillium in Melanthiaceae.http://dx.doi.org/10.1080/23802359.2021.1959450paris polyphylla var. alba h.li & r.j.mitchellcomplete chloroplast genomephylogenymelanthiaceae |
| spellingShingle | Yuan Jiang Qingshu Yang Jing Wang Jun Qian Baozhong Duan The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis Mitochondrial DNA. Part B. Resources paris polyphylla var. alba h.li & r.j.mitchell complete chloroplast genome phylogeny melanthiaceae |
| title | The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis |
| title_full | The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis |
| title_fullStr | The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis |
| title_full_unstemmed | The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis |
| title_short | The complete chloroplast genome sequence of Paris polyphylla var. alba H.Li & R.J.Mitchell and its phylogenetic analysis |
| title_sort | complete chloroplast genome sequence of paris polyphylla var alba h li r j mitchell and its phylogenetic analysis |
| topic | paris polyphylla var. alba h.li & r.j.mitchell complete chloroplast genome phylogeny melanthiaceae |
| url | http://dx.doi.org/10.1080/23802359.2021.1959450 |
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