Identification of cuproptosis-related genes for predicting the development of prostate cancer
Copper can be toxic at very high intracellular concentrations and can inhibit prostate cancer (PCa) progression. Recently, a study reported the mechanism of cuproptosis and the potentially associated genes. However, the function of these cuproptosis-related genes in PCa remains unknown. Based on the...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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De Gruyter
2023-09-01
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| Series: | Open Medicine |
| Subjects: | |
| Online Access: | https://doi.org/10.1515/med-2023-0717 |
| _version_ | 1797688842319298560 |
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| author | Wang Xin’an Chen Xi Xu Chengdang Zhou Weidong Wu Denglong |
| author_facet | Wang Xin’an Chen Xi Xu Chengdang Zhou Weidong Wu Denglong |
| author_sort | Wang Xin’an |
| collection | DOAJ |
| description | Copper can be toxic at very high intracellular concentrations and can inhibit prostate cancer (PCa) progression. Recently, a study reported the mechanism of cuproptosis and the potentially associated genes. However, the function of these cuproptosis-related genes in PCa remains unknown. Based on the RNA sequence and clinical data from public databases, we analyzed the clinical value of cuproptosis-related genes in PCa. DLD, DLAT, PDHA1, and CDKN2A were expressed differently between normal and PCa tissues. The FDX1, LIAS, DLAT, GLS, and CDKN2A genes can affect PCa progression, while PDHA1 and CDKN2A influence the patients’ disease-free survival (DFS) status. The expression of LIAS, LIPT1, DLAT, and PDHB did not alter upon the incidence of PCa in Chinese patients. A constructed regression model showed that FDX1, PDHA1, MTF1, and CDKN2A can be risk factors leading to PCa in both Western and Chinese patients with PCa. The lasso regression model reflected that these genes can affect the patients’ DFS status. Additionally, the cuproptosis-related genes were associated with immune cell infiltration. We also verified the high expression of PDHA1 and CDKN2A, in clinical samples. In conclusion, we identified a novel cuproptosis-related gene signature for predicting the development of PCa. |
| first_indexed | 2024-03-12T01:36:29Z |
| format | Article |
| id | doaj.art-b07944a008a6458d8614fa9aae477a1b |
| institution | Directory Open Access Journal |
| issn | 2391-5463 |
| language | English |
| last_indexed | 2024-03-12T01:36:29Z |
| publishDate | 2023-09-01 |
| publisher | De Gruyter |
| record_format | Article |
| series | Open Medicine |
| spelling | doaj.art-b07944a008a6458d8614fa9aae477a1b2023-09-11T07:00:06ZengDe GruyterOpen Medicine2391-54632023-09-0118173310.1515/med-2023-0717Identification of cuproptosis-related genes for predicting the development of prostate cancerWang Xin’an0Chen Xi1Xu Chengdang2Zhou Weidong3Wu Denglong4Department of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, 200065, ChinaDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, 200065, ChinaDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, 200065, ChinaDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, 389, Xincun Road, Shanghai, 200065, ChinaDepartment of Urology, Tongji Hospital, School of Medicine, Tongji University, 389, Xincun Road, Shanghai, 200065, ChinaCopper can be toxic at very high intracellular concentrations and can inhibit prostate cancer (PCa) progression. Recently, a study reported the mechanism of cuproptosis and the potentially associated genes. However, the function of these cuproptosis-related genes in PCa remains unknown. Based on the RNA sequence and clinical data from public databases, we analyzed the clinical value of cuproptosis-related genes in PCa. DLD, DLAT, PDHA1, and CDKN2A were expressed differently between normal and PCa tissues. The FDX1, LIAS, DLAT, GLS, and CDKN2A genes can affect PCa progression, while PDHA1 and CDKN2A influence the patients’ disease-free survival (DFS) status. The expression of LIAS, LIPT1, DLAT, and PDHB did not alter upon the incidence of PCa in Chinese patients. A constructed regression model showed that FDX1, PDHA1, MTF1, and CDKN2A can be risk factors leading to PCa in both Western and Chinese patients with PCa. The lasso regression model reflected that these genes can affect the patients’ DFS status. Additionally, the cuproptosis-related genes were associated with immune cell infiltration. We also verified the high expression of PDHA1 and CDKN2A, in clinical samples. In conclusion, we identified a novel cuproptosis-related gene signature for predicting the development of PCa.https://doi.org/10.1515/med-2023-0717cuproptosishub geneprostate cancerbioinformatics analysiscancer development |
| spellingShingle | Wang Xin’an Chen Xi Xu Chengdang Zhou Weidong Wu Denglong Identification of cuproptosis-related genes for predicting the development of prostate cancer Open Medicine cuproptosis hub gene prostate cancer bioinformatics analysis cancer development |
| title | Identification of cuproptosis-related genes for predicting the development of prostate cancer |
| title_full | Identification of cuproptosis-related genes for predicting the development of prostate cancer |
| title_fullStr | Identification of cuproptosis-related genes for predicting the development of prostate cancer |
| title_full_unstemmed | Identification of cuproptosis-related genes for predicting the development of prostate cancer |
| title_short | Identification of cuproptosis-related genes for predicting the development of prostate cancer |
| title_sort | identification of cuproptosis related genes for predicting the development of prostate cancer |
| topic | cuproptosis hub gene prostate cancer bioinformatics analysis cancer development |
| url | https://doi.org/10.1515/med-2023-0717 |
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