The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors

Antibiotic resistance is a major health problem worldwide, causing more deaths than diabetes and cancer. The dissemination of vertical and horizontal antibiotic resistance genes has been conducted for a selection of pan-resistant bacteria. Here, we test if the aerobic and anaerobic bacteria from hum...

Full description

Bibliographic Details
Main Authors: Rosalino Vázquez-López, Sandra Solano-Gálvez, Diego Abelardo Álvarez-Hernández, Jorge Alberto Ascencio-Aragón, Eduardo Gómez-Conde, Celia Piña-Leyva, Manuel Lara-Lozano, Tayde Guerrero-González, Juan Antonio González-Barrios
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Pharmaceuticals
Subjects:
Online Access:https://www.mdpi.com/1424-8247/14/6/533
_version_ 1797531537367891968
author Rosalino Vázquez-López
Sandra Solano-Gálvez
Diego Abelardo Álvarez-Hernández
Jorge Alberto Ascencio-Aragón
Eduardo Gómez-Conde
Celia Piña-Leyva
Manuel Lara-Lozano
Tayde Guerrero-González
Juan Antonio González-Barrios
author_facet Rosalino Vázquez-López
Sandra Solano-Gálvez
Diego Abelardo Álvarez-Hernández
Jorge Alberto Ascencio-Aragón
Eduardo Gómez-Conde
Celia Piña-Leyva
Manuel Lara-Lozano
Tayde Guerrero-González
Juan Antonio González-Barrios
author_sort Rosalino Vázquez-López
collection DOAJ
description Antibiotic resistance is a major health problem worldwide, causing more deaths than diabetes and cancer. The dissemination of vertical and horizontal antibiotic resistance genes has been conducted for a selection of pan-resistant bacteria. Here, we test if the aerobic and anaerobic bacteria from human feces samples in health conditions are carriers of beta-lactamases genes. The samples were cultured in a brain–heart infusion medium and subcultured in blood agar in aerobic and anaerobic conditions for 24 h at 37 °C. The grown colonies were identified by their biochemical profiles. The DNA was extracted and purified by bacterial lysis using thermal shock and were used in the endpoint PCR and next generation sequencing to identify beta-lactamase genes expression (OXA, VIM, SHV, TEM, IMP, ROB, KPC, CMY, DHA, P, CFX, LAP, and BIL). The aerobic bacterias Aeromonas hydrophila, Citrobacter freundii, Proteus mirabilis, Providencia rettgeri, Serratia fonticola, Serratia liquefaciens, Enterobacter aerogenes, Escherichia coli, Klebsiella pneumoniae, Pantoea agglomerans, Enterococcus faecalis, and Enterobacter cloacae, the anaerobic bacteria: Capnocytophaga species, Bacteroides distasonis, Bifidobacterium adolescentis, Bacteroides ovatus, Bacteroides fragilis, Eubacterium species, Eubacterium aerofaciens, Peptostreptococcus anaerobius, Fusobacterium species, Bacteroides species, and Bacteroides vulgatus were isolated and identified. The results showed 49 strains resistant to beta-lactam with the expression of blaSHV (10.2%), blaTEM (100%), blaKPC (10.2%), blaCYM (14.3%), blaP (2%), blaCFX (8.2%), and blaBIL (6.1%). These data support the idea that the human enteric microbiota constitutes an important reservoir of genes for resistance to beta-lactamases and that such genes could be transferred to pathogenic bacteria.
first_indexed 2024-03-10T10:46:10Z
format Article
id doaj.art-b0e3f54e535649848c7068ac4046ad29
institution Directory Open Access Journal
issn 1424-8247
language English
last_indexed 2024-03-10T10:46:10Z
publishDate 2021-06-01
publisher MDPI AG
record_format Article
series Pharmaceuticals
spelling doaj.art-b0e3f54e535649848c7068ac4046ad292023-11-21T22:37:07ZengMDPI AGPharmaceuticals1424-82472021-06-0114653310.3390/ph14060533The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy DonorsRosalino Vázquez-López0Sandra Solano-Gálvez1Diego Abelardo Álvarez-Hernández2Jorge Alberto Ascencio-Aragón3Eduardo Gómez-Conde4Celia Piña-Leyva5Manuel Lara-Lozano6Tayde Guerrero-González7Juan Antonio González-Barrios8Departamento de Microbiología, Centro de Investigación en Ciencias de la Salud (CICSA) Facultad de Ciencias de la Salud Universidad Anáhuac Mexico Norte, Huixquilucan 52786, MexicoDepartamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México, Coyoacán, Ciudad de México 04510, MexicoDepartamento de Microbiología, Centro de Investigación en Ciencias de la Salud (CICSA) Facultad de Ciencias de la Salud Universidad Anáhuac Mexico Norte, Huixquilucan 52786, MexicoDepartamento de Microbiología, Centro de Investigación en Ciencias de la Salud (CICSA) Facultad de Ciencias de la Salud Universidad Anáhuac Mexico Norte, Huixquilucan 52786, MexicoLaboratorio de Investigación en Inmunobiología, Facultad de Medicina, Benemérita Universidad Autónoma de Puebla (BUAP), Puebla 72420, MexicoLaboratorio de Medicina Genómica, Hospital Regional “Primero de Octubre”, ISSSTE, Av. Instituto Politécnico Nacional 1669, Lindavista, Gustavo A. Madero, Ciudad de México 07300, MexicoLaboratorio de Medicina Genómica, Hospital Regional “Primero de Octubre”, ISSSTE, Av. Instituto Politécnico Nacional 1669, Lindavista, Gustavo A. Madero, Ciudad de México 07300, MexicoLaboratorio de Medicina Genómica, Hospital Regional “Primero de Octubre”, ISSSTE, Av. Instituto Politécnico Nacional 1669, Lindavista, Gustavo A. Madero, Ciudad de México 07300, MexicoLaboratorio de Medicina Genómica, Hospital Regional “Primero de Octubre”, ISSSTE, Av. Instituto Politécnico Nacional 1669, Lindavista, Gustavo A. Madero, Ciudad de México 07300, MexicoAntibiotic resistance is a major health problem worldwide, causing more deaths than diabetes and cancer. The dissemination of vertical and horizontal antibiotic resistance genes has been conducted for a selection of pan-resistant bacteria. Here, we test if the aerobic and anaerobic bacteria from human feces samples in health conditions are carriers of beta-lactamases genes. The samples were cultured in a brain–heart infusion medium and subcultured in blood agar in aerobic and anaerobic conditions for 24 h at 37 °C. The grown colonies were identified by their biochemical profiles. The DNA was extracted and purified by bacterial lysis using thermal shock and were used in the endpoint PCR and next generation sequencing to identify beta-lactamase genes expression (OXA, VIM, SHV, TEM, IMP, ROB, KPC, CMY, DHA, P, CFX, LAP, and BIL). The aerobic bacterias Aeromonas hydrophila, Citrobacter freundii, Proteus mirabilis, Providencia rettgeri, Serratia fonticola, Serratia liquefaciens, Enterobacter aerogenes, Escherichia coli, Klebsiella pneumoniae, Pantoea agglomerans, Enterococcus faecalis, and Enterobacter cloacae, the anaerobic bacteria: Capnocytophaga species, Bacteroides distasonis, Bifidobacterium adolescentis, Bacteroides ovatus, Bacteroides fragilis, Eubacterium species, Eubacterium aerofaciens, Peptostreptococcus anaerobius, Fusobacterium species, Bacteroides species, and Bacteroides vulgatus were isolated and identified. The results showed 49 strains resistant to beta-lactam with the expression of blaSHV (10.2%), blaTEM (100%), blaKPC (10.2%), blaCYM (14.3%), blaP (2%), blaCFX (8.2%), and blaBIL (6.1%). These data support the idea that the human enteric microbiota constitutes an important reservoir of genes for resistance to beta-lactamases and that such genes could be transferred to pathogenic bacteria.https://www.mdpi.com/1424-8247/14/6/533microbiomebeta-lactamsbeta-lactamasesresistome
spellingShingle Rosalino Vázquez-López
Sandra Solano-Gálvez
Diego Abelardo Álvarez-Hernández
Jorge Alberto Ascencio-Aragón
Eduardo Gómez-Conde
Celia Piña-Leyva
Manuel Lara-Lozano
Tayde Guerrero-González
Juan Antonio González-Barrios
The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors
Pharmaceuticals
microbiome
beta-lactams
beta-lactamases
resistome
title The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors
title_full The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors
title_fullStr The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors
title_full_unstemmed The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors
title_short The Beta-Lactam Resistome Expressed by Aerobic and Anaerobic Bacteria Isolated from Human Feces of Healthy Donors
title_sort beta lactam resistome expressed by aerobic and anaerobic bacteria isolated from human feces of healthy donors
topic microbiome
beta-lactams
beta-lactamases
resistome
url https://www.mdpi.com/1424-8247/14/6/533
work_keys_str_mv AT rosalinovazquezlopez thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT sandrasolanogalvez thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT diegoabelardoalvarezhernandez thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT jorgealbertoascencioaragon thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT eduardogomezconde thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT celiapinaleyva thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT manuellaralozano thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT taydeguerrerogonzalez thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT juanantoniogonzalezbarrios thebetalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT rosalinovazquezlopez betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT sandrasolanogalvez betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT diegoabelardoalvarezhernandez betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT jorgealbertoascencioaragon betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT eduardogomezconde betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT celiapinaleyva betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT manuellaralozano betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT taydeguerrerogonzalez betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors
AT juanantoniogonzalezbarrios betalactamresistomeexpressedbyaerobicandanaerobicbacteriaisolatedfromhumanfecesofhealthydonors