Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales)
Sarcandra glabra is a perennial evergreen subshrub, with high ornamental and medicinal value. Using the Illumina high-throughput sequencing data, its chloroplast genome is well assembled and characterized. The complete chloroplast genome is 158,872 bp in length with a typical quadripartite structure...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1715858 |
| _version_ | 1797639435517427712 |
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| author | Wei Wang Peishan Zou Guofeng Liu Seping Dai |
| author_facet | Wei Wang Peishan Zou Guofeng Liu Seping Dai |
| author_sort | Wei Wang |
| collection | DOAJ |
| description | Sarcandra glabra is a perennial evergreen subshrub, with high ornamental and medicinal value. Using the Illumina high-throughput sequencing data, its chloroplast genome is well assembled and characterized. The complete chloroplast genome is 158,872 bp in length with a typical quadripartite structure: a pair of inverted repeats (IRs) of 26,122 bp for each, an 88,182 bp large single-copy (LSC) region and an 18,445 bp small single-copy (SSC) region. It was composed of 128 genes and they were identified 84 coding genes, 8 rRNA genes, 36 tRNA genes. Phylogenetic analysis confirmed that the position of S. glabra lay within the order Chloranthales instead of Piperales simply according to classical morphological taxonomy. |
| first_indexed | 2024-03-11T13:17:51Z |
| format | Article |
| id | doaj.art-b0ecb293e62f43059dd640d86a555105 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:51Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b0ecb293e62f43059dd640d86a5551052023-11-03T11:00:21ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015186486510.1080/23802359.2020.17158581715858Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales)Wei Wang0Peishan Zou1Guofeng Liu2Seping Dai3Guangzhou Institute of Forestry and Landscape ArchitectureGuangzhou Institute of Forestry and Landscape ArchitectureGuangzhou Institute of Forestry and Landscape ArchitectureGuangzhou Institute of Forestry and Landscape ArchitectureSarcandra glabra is a perennial evergreen subshrub, with high ornamental and medicinal value. Using the Illumina high-throughput sequencing data, its chloroplast genome is well assembled and characterized. The complete chloroplast genome is 158,872 bp in length with a typical quadripartite structure: a pair of inverted repeats (IRs) of 26,122 bp for each, an 88,182 bp large single-copy (LSC) region and an 18,445 bp small single-copy (SSC) region. It was composed of 128 genes and they were identified 84 coding genes, 8 rRNA genes, 36 tRNA genes. Phylogenetic analysis confirmed that the position of S. glabra lay within the order Chloranthales instead of Piperales simply according to classical morphological taxonomy.http://dx.doi.org/10.1080/23802359.2020.1715858sarcandra glabrachloroplast genomephylogenetic analysis |
| spellingShingle | Wei Wang Peishan Zou Guofeng Liu Seping Dai Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales) Mitochondrial DNA. Part B. Resources sarcandra glabra chloroplast genome phylogenetic analysis |
| title | Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales) |
| title_full | Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales) |
| title_fullStr | Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales) |
| title_full_unstemmed | Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales) |
| title_short | Characterization of the complete chloroplast genome sequence of Sarcandra glabra (Chloranthales) |
| title_sort | characterization of the complete chloroplast genome sequence of sarcandra glabra chloranthales |
| topic | sarcandra glabra chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1715858 |
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