Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae
The complete mitogenome of Myersina filifer was sequenced, which is a closed double-stranded circular molecule of 16,505 bp, we analyzed the main features in terms of the genome organization, gene arrangement, and codon usage. The overall base composition includes A(27.4%), C(28.0%), T(27.1%) and G(...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1613190 |
| _version_ | 1797639808675217408 |
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| author | Jianshe Zhang Xiao Yang Bin Shen |
| author_facet | Jianshe Zhang Xiao Yang Bin Shen |
| author_sort | Jianshe Zhang |
| collection | DOAJ |
| description | The complete mitogenome of Myersina filifer was sequenced, which is a closed double-stranded circular molecule of 16,505 bp, we analyzed the main features in terms of the genome organization, gene arrangement, and codon usage. The overall base composition includes A(27.4%), C(28.0%), T(27.1%) and G(17.5%). Moreover, the 13 protein-coding genes (PCGs) encode 3801 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have a complete stop codon, whereas four PCGs end with the incomplete stop codon TA– or a single T. The phylogenetic tree based on the Neighbor-Joining method was conducted to provide relationship within Gobiidae, the NJ tree demonstrated that M. filifer has the closest relationship with M. macrostoma, which contributed to phylogenetic studies of Gobiidae and additional information of management for this species. |
| first_indexed | 2024-03-11T13:22:42Z |
| format | Article |
| id | doaj.art-b1650d5f00db45498f325ba2640ffb0e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:22:42Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b1650d5f00db45498f325ba2640ffb0e2023-11-03T10:06:46ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411855185610.1080/23802359.2019.16131901613190Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of GobiidaeJianshe Zhang0Xiao Yang1Bin Shen2Zhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityThe complete mitogenome of Myersina filifer was sequenced, which is a closed double-stranded circular molecule of 16,505 bp, we analyzed the main features in terms of the genome organization, gene arrangement, and codon usage. The overall base composition includes A(27.4%), C(28.0%), T(27.1%) and G(17.5%). Moreover, the 13 protein-coding genes (PCGs) encode 3801 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have a complete stop codon, whereas four PCGs end with the incomplete stop codon TA– or a single T. The phylogenetic tree based on the Neighbor-Joining method was conducted to provide relationship within Gobiidae, the NJ tree demonstrated that M. filifer has the closest relationship with M. macrostoma, which contributed to phylogenetic studies of Gobiidae and additional information of management for this species.http://dx.doi.org/10.1080/23802359.2019.1613190myersina filifermitogenomephylogenetic tree |
| spellingShingle | Jianshe Zhang Xiao Yang Bin Shen Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae Mitochondrial DNA. Part B. Resources myersina filifer mitogenome phylogenetic tree |
| title | Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae |
| title_full | Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae |
| title_fullStr | Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae |
| title_full_unstemmed | Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae |
| title_short | Complete mitochondrial genome of Myersina filifer (Gobiiformes, Gobiidae) and phylogenetic analysis of Gobiidae |
| title_sort | complete mitochondrial genome of myersina filifer gobiiformes gobiidae and phylogenetic analysis of gobiidae |
| topic | myersina filifer mitogenome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2019.1613190 |
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