Rhizosphere microorganisms can influence the timing of plant flowering

Abstract Background Plant phenology has crucial biological, physical, and chemical effects on the biosphere. Phenological drivers have largely been studied, but the role of plant microbiota, particularly rhizosphere microbiota, has not been considered. Results We discovered that rhizosphere microbia...

Full description

Bibliographic Details
Main Authors: Tao Lu, Mingjing Ke, Michel Lavoie, Yujian Jin, Xiaoji Fan, Zhenyan Zhang, Zhengwei Fu, Liwei Sun, Michael Gillings, Josep Peñuelas, Haifeng Qian, Yong-Guan Zhu
Format: Article
Language:English
Published: BMC 2018-12-01
Series:Microbiome
Subjects:
Online Access:http://link.springer.com/article/10.1186/s40168-018-0615-0
_version_ 1811197549793509376
author Tao Lu
Mingjing Ke
Michel Lavoie
Yujian Jin
Xiaoji Fan
Zhenyan Zhang
Zhengwei Fu
Liwei Sun
Michael Gillings
Josep Peñuelas
Haifeng Qian
Yong-Guan Zhu
author_facet Tao Lu
Mingjing Ke
Michel Lavoie
Yujian Jin
Xiaoji Fan
Zhenyan Zhang
Zhengwei Fu
Liwei Sun
Michael Gillings
Josep Peñuelas
Haifeng Qian
Yong-Guan Zhu
author_sort Tao Lu
collection DOAJ
description Abstract Background Plant phenology has crucial biological, physical, and chemical effects on the biosphere. Phenological drivers have largely been studied, but the role of plant microbiota, particularly rhizosphere microbiota, has not been considered. Results We discovered that rhizosphere microbial communities could modulate the timing of flowering of Arabidopsis thaliana. Rhizosphere microorganisms that increased and prolonged N bioavailability by nitrification delayed flowering by converting tryptophan to the phytohormone indole acetic acid (IAA), thus downregulating genes that trigger flowering, and stimulating further plant growth. The addition of IAA to hydroponic cultures confirmed this metabolic network. Conclusions We document a novel metabolic network in which soil microbiota influenced plant flowering time, thus shedding light on the key role of soil microbiota on plant functioning. This opens up multiple opportunities for application, from helping to mitigate some of the effects of climate change and environmental stress on plants (e.g. abnormal temperature variation, drought, salinity) to manipulating plant characteristics using microbial inocula to increase crop potential.
first_indexed 2024-04-12T01:16:48Z
format Article
id doaj.art-b21ae28515a643f8a38d6e9c17f420ce
institution Directory Open Access Journal
issn 2049-2618
language English
last_indexed 2024-04-12T01:16:48Z
publishDate 2018-12-01
publisher BMC
record_format Article
series Microbiome
spelling doaj.art-b21ae28515a643f8a38d6e9c17f420ce2022-12-22T03:53:57ZengBMCMicrobiome2049-26182018-12-016111210.1186/s40168-018-0615-0Rhizosphere microorganisms can influence the timing of plant floweringTao Lu0Mingjing Ke1Michel Lavoie2Yujian Jin3Xiaoji Fan4Zhenyan Zhang5Zhengwei Fu6Liwei Sun7Michael Gillings8Josep Peñuelas9Haifeng Qian10Yong-Guan Zhu11College of Environment, Zhejiang University of TechnologyCollege of Environment, Zhejiang University of TechnologyQuebec-Ocean and Takuvik Joint International Research Unit, Université LavalCollege of Environment, Zhejiang University of TechnologyCollege of Environment, Zhejiang University of TechnologyCollege of Environment, Zhejiang University of TechnologyCollege of Biotechnology and Bioengineering, Zhejiang University of TechnologyCollege of Environment, Zhejiang University of TechnologyDepartment of Biological Sciences, Macquarie UniversityCSIC, Global Ecology Unit, CREAF-CSIC-UABCollege of Environment, Zhejiang University of TechnologyKey Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of SciencesAbstract Background Plant phenology has crucial biological, physical, and chemical effects on the biosphere. Phenological drivers have largely been studied, but the role of plant microbiota, particularly rhizosphere microbiota, has not been considered. Results We discovered that rhizosphere microbial communities could modulate the timing of flowering of Arabidopsis thaliana. Rhizosphere microorganisms that increased and prolonged N bioavailability by nitrification delayed flowering by converting tryptophan to the phytohormone indole acetic acid (IAA), thus downregulating genes that trigger flowering, and stimulating further plant growth. The addition of IAA to hydroponic cultures confirmed this metabolic network. Conclusions We document a novel metabolic network in which soil microbiota influenced plant flowering time, thus shedding light on the key role of soil microbiota on plant functioning. This opens up multiple opportunities for application, from helping to mitigate some of the effects of climate change and environmental stress on plants (e.g. abnormal temperature variation, drought, salinity) to manipulating plant characteristics using microbial inocula to increase crop potential.http://link.springer.com/article/10.1186/s40168-018-0615-0RhizosphereMicrobiotaRoot exudateNitrogenIndole acetic acidArabidopsis
spellingShingle Tao Lu
Mingjing Ke
Michel Lavoie
Yujian Jin
Xiaoji Fan
Zhenyan Zhang
Zhengwei Fu
Liwei Sun
Michael Gillings
Josep Peñuelas
Haifeng Qian
Yong-Guan Zhu
Rhizosphere microorganisms can influence the timing of plant flowering
Microbiome
Rhizosphere
Microbiota
Root exudate
Nitrogen
Indole acetic acid
Arabidopsis
title Rhizosphere microorganisms can influence the timing of plant flowering
title_full Rhizosphere microorganisms can influence the timing of plant flowering
title_fullStr Rhizosphere microorganisms can influence the timing of plant flowering
title_full_unstemmed Rhizosphere microorganisms can influence the timing of plant flowering
title_short Rhizosphere microorganisms can influence the timing of plant flowering
title_sort rhizosphere microorganisms can influence the timing of plant flowering
topic Rhizosphere
Microbiota
Root exudate
Nitrogen
Indole acetic acid
Arabidopsis
url http://link.springer.com/article/10.1186/s40168-018-0615-0
work_keys_str_mv AT taolu rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT mingjingke rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT michellavoie rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT yujianjin rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT xiaojifan rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT zhenyanzhang rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT zhengweifu rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT liweisun rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT michaelgillings rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT joseppenuelas rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT haifengqian rhizospheremicroorganismscaninfluencethetimingofplantflowering
AT yongguanzhu rhizospheremicroorganismscaninfluencethetimingofplantflowering