Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals

The advent of CRISPR/Cas9 technology has revolutionized genome editing, enabling the attainment of once-unimaginable goals. CRISPR/Cas’s groundbreaking attributes lie in its simplicity, versatility, universality, and independence from customized DNA-protein systems, erasing the need for specialized...

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Main Authors: Aurélien Devillars, Gabriele Magon, Carlotta Pirrello, Fabio Palumbo, Silvia Farinati, Gianni Barcaccia, Margherita Lucchin, Alessandro Vannozzi
Format: Article
Language:English
Published: MDPI AG 2024-03-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/25/6/3271
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author Aurélien Devillars
Gabriele Magon
Carlotta Pirrello
Fabio Palumbo
Silvia Farinati
Gianni Barcaccia
Margherita Lucchin
Alessandro Vannozzi
author_facet Aurélien Devillars
Gabriele Magon
Carlotta Pirrello
Fabio Palumbo
Silvia Farinati
Gianni Barcaccia
Margherita Lucchin
Alessandro Vannozzi
author_sort Aurélien Devillars
collection DOAJ
description The advent of CRISPR/Cas9 technology has revolutionized genome editing, enabling the attainment of once-unimaginable goals. CRISPR/Cas’s groundbreaking attributes lie in its simplicity, versatility, universality, and independence from customized DNA-protein systems, erasing the need for specialized expertise and broadening its scope of applications. It is therefore more and more used for genome modification including the generation of mutants. Beyond such editing scopes, the recent development of novel or modified Cas-based systems has spawned an array of additional biotechnological tools, empowering both fundamental and applied research. Precisely targeting DNA or RNA sequences, the CRISPR/Cas system has been harnessed in fields as diverse as gene regulation, deepening insights into gene expression, epigenetic changes, genome spatial organization, and chromatin dynamics. Furthermore, it aids in genome imaging and sequencing, as well as effective identification and countering of viral pathogens in plants and animals. All in all, the non-editing aspect of CRISPR/Cas exhibits tremendous potential across diverse domains, including diagnostics, biotechnology, and fundamental research. This article reviews and critically evaluates the primary CRISPR/Cas-based tools developed for plants and animals, underlining their transformative impact.
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spelling doaj.art-b22c99025b3c46008c072334864c4cc62024-03-27T13:45:33ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672024-03-01256327110.3390/ijms25063271Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and AnimalsAurélien Devillars0Gabriele Magon1Carlotta Pirrello2Fabio Palumbo3Silvia Farinati4Gianni Barcaccia5Margherita Lucchin6Alessandro Vannozzi7Department of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyDepartment of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyResearch and Innovation Centre, Fondazione Edmund Mach, Via E. Mach 1, 38098 San Michele all’Adige, TN, ItalyDepartment of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyDepartment of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyDepartment of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyDepartment of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyDepartment of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Agripolis, Viale dell’Università 16, 35020 Legnaro, PD, ItalyThe advent of CRISPR/Cas9 technology has revolutionized genome editing, enabling the attainment of once-unimaginable goals. CRISPR/Cas’s groundbreaking attributes lie in its simplicity, versatility, universality, and independence from customized DNA-protein systems, erasing the need for specialized expertise and broadening its scope of applications. It is therefore more and more used for genome modification including the generation of mutants. Beyond such editing scopes, the recent development of novel or modified Cas-based systems has spawned an array of additional biotechnological tools, empowering both fundamental and applied research. Precisely targeting DNA or RNA sequences, the CRISPR/Cas system has been harnessed in fields as diverse as gene regulation, deepening insights into gene expression, epigenetic changes, genome spatial organization, and chromatin dynamics. Furthermore, it aids in genome imaging and sequencing, as well as effective identification and countering of viral pathogens in plants and animals. All in all, the non-editing aspect of CRISPR/Cas exhibits tremendous potential across diverse domains, including diagnostics, biotechnology, and fundamental research. This article reviews and critically evaluates the primary CRISPR/Cas-based tools developed for plants and animals, underlining their transformative impact.https://www.mdpi.com/1422-0067/25/6/3271CRISPR/Casimaginggene regulationNGSvirusesCRISPR/Cas9
spellingShingle Aurélien Devillars
Gabriele Magon
Carlotta Pirrello
Fabio Palumbo
Silvia Farinati
Gianni Barcaccia
Margherita Lucchin
Alessandro Vannozzi
Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals
International Journal of Molecular Sciences
CRISPR/Cas
imaging
gene regulation
NGS
viruses
CRISPR/Cas9
title Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals
title_full Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals
title_fullStr Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals
title_full_unstemmed Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals
title_short Not Only Editing: A Cas-Cade of CRISPR/Cas-Based Tools for Functional Genomics in Plants and Animals
title_sort not only editing a cas cade of crispr cas based tools for functional genomics in plants and animals
topic CRISPR/Cas
imaging
gene regulation
NGS
viruses
CRISPR/Cas9
url https://www.mdpi.com/1422-0067/25/6/3271
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