Patterns of Chromosomal Variation, Homoeologous Exchange, and Their Relationship with Genomic Features in Early Generations of a Synthetic Rice Segmental Allotetraploid

Patterns of Chromosomal Variation, Homoeologous Exchange, and Their Relationship with Genomic Features in Early Generations of a Synthetic Rice Segmental Allotetraploid

Polyploidization is a driving force in plant evolution. Chromosomal variation often occurs at early generations following polyploid formation due to meiotic pairing irregularity that may compromise segregation fidelity and cause homoeologous exchange (HE). The trends of chromosomal variation and esp...

Full description

Bibliographic Details
Main Authors:	Guo Li, Ying Wu, Yan Bai, Na Zhao, Yuhui Jiang, Ning Li, Xiuyun Lin, Bao Liu, Chunming Xu
Format:	Article
Language:	English
Published:	MDPI AG 2023-03-01
Series:	International Journal of Molecular Sciences
Subjects:	polyploidization chromosomal variation homoeologous exchange genomic feature transposable elements rice
Online Access:	https://www.mdpi.com/1422-0067/24/7/6065

Similar Items

Effects of Allopolyploidization and Homoeologous Chromosomal Segment Exchange on Homoeolog Expression in a Synthetic Allotetraploid Wheat under Variable Environmental Conditions
by: Zhibin Zhang, et al.
Published: (2023-08-01)

Homoeologous Exchanges, Segmental Allopolyploidy, and Polyploid Genome Evolution
by: Annaliese S. Mason, et al.
Published: (2020-08-01)

Subgenome-biased expression and functional diversification of a Na+/H+ antiporter homoeologs in salt tolerance of polyploid wheat
by: Mei Zheng, et al.
Published: (2022-12-01)

The KL system in wheat permits homoeologous crossing over between closely related chromosomes
by: Chaolan Fan, et al.
Published: (2023-06-01)

Homoeologous evolution of the allotetraploid genome of Poa annua L.
by: Christopher W. Benson, et al.
Published: (2023-06-01)

Homoeologous Chromosomes From Two Hordeum Species Can Recognize and Associate During Meiosis in Wheat in the Presence of the Ph1 Locus
by: María C. Calderón, et al.
Published: (2018-05-01)

Homoeolog expression bias and expression level dominance (ELD) in four tissues of natural allotetraploid Brassica napus
by: Mengdi Li, et al.
Published: (2020-04-01)

A transcriptomic view of the ability of nascent hexaploid wheat to tolerate aneuploidy
by: Deying Zeng, et al.
Published: (2020-03-01)

Wild and Cultivated Homoeologous Barley Chromosomes Can Associate and Recombine in Wheat in the Absence of the <i>Ph1</i> Locus
by: María Carmen Calderón, et al.
Published: (2021-01-01)

A New Way of Rice Breeding: Polyploid Rice Breeding
by: Rongrong Chen, et al.
Published: (2021-02-01)

The genes on homoeologous group 3 chromosomes determine brittle rachides in Triticum and Aegilops
by: N. Watanabe, et al.
Published: (2005-12-01)

Homoeologous Recombination: A Novel and Efficient System for Broadening the Genetic Variability in Wheat
by: Dal-Hoe Koo, et al.
Published: (2020-07-01)

The Battle to Sequence the Bread Wheat Genome: A Tale of the Three Kingdoms
by: Jiantao Guan, et al.
Published: (2020-06-01)

Chromosome Pairing in Polyploid Grasses
by: Radim Svačina, et al.
Published: (2020-07-01)

Assigning confidence scores to homoeologs using fuzzy logic
by: Natasha M. Glover, et al.
Published: (2019-01-01)

Chromosome Stability of Synthetic-Natural Wheat Hybrids
by: Laibin Zhao, et al.
Published: (2021-03-01)

Homoeologous Genes in Triticum aestivum L.: Structural Characteristics and Differential Activity
by: A.G. Sulkarnayeva, et al.
Published: (2017-06-01)

TaRECQ4 contributes to maintain both homologous and homoeologous recombination during wheat meiosis
by: Jeanne Bazile, et al.
Published: (2024-01-01)

ASYNAPSIS 1 ensures crossover fidelity in polyploid wheat by promoting homologous recombination and suppressing non-homologous recombination
by: Chiara Di Dio, et al.
Published: (2023-05-01)

Homoeologous chromosome pairing at metaphase I of meiosis in <i>Hordeum vulgare</i> L. × <i>H. bulbosum</i> L. triploid hybrids (HvHbHb)
by: G. I. Pendinen, et al.
Published: (2020-12-01)

Structural and functional divergence of homoeologous genes in allopolyploid plant genomes
by: A. Y. Glagoleva, et al.
Published: (2017-02-01)

CHROMOSOMAL ANALYSIS OF EIGHT CULTIVARS IN THREE SPECIES OF CULTIVATED YAM (DIOSCOREA) SPECIES IN NIGERIA
by: Joshua Matthew, et al.
Published: (2021-08-01)

Problematic octaploid forms and a new chromosome number in the genus Achillea L., 2n = 126
by: Janina Dąbrowska
Published: (2014-01-01)

Subgenome evolutionary dynamics in allotetraploid ferns: insights from the gene expression patterns in the allotetraploid species Phegopteris decursivepinnata (Thelypteridacea, Polypodiales)
by: Natsu Katayama, et al.
Published: (2024-01-01)

Molecular characterization and expression analysis of three homoeologous Ta14S genes encoding 14-3-3 proteins in wheat (Triticum aestivum L.)
by: Xinguo Wang, et al.
Published: (2016-06-01)

Differential chromatin accessibility landscape reveals structural and functional features of the allopolyploid wheat chromosomes
by: Katherine W. Jordan, et al.
Published: (2020-07-01)

Detection and mapping of homologous and homoeologous segments in homoeologous groups of allotetraploid cotton by BAC-FISH
by: Zhang Tianzhen, et al.
Published: (2007-06-01)

Phenotypic variation of a new synthetic allotetraploid Arabidopsis kamchatica enhanced in natural environment
by: Rie Shimizu-Inatsugi, et al.
Published: (2023-01-01)

Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris
by: Tatsuhiro Nomaguchi, et al.
Published: (2018-05-01)

Comparative Analysis of Root Transcriptome Reveals Candidate Genes and Expression Divergence of Homoeologous Genes in Response to Water Stress in Wheat
by: Behnam Derakhshani, et al.
Published: (2020-05-01)

Introgression of Seedling Plant Resistance to Leaf Rust from <i>Agropyron cristatum</i> into Wheat by Induced Homoeologous Recombination
by: Adoración Cabrera, et al.
Published: (2023-01-01)

Spatial and Temporal Transcriptomic Heredity and Asymmetry in an Artificially Constructed Allotetraploid Wheat (AADD)
by: Xintong Ma, et al.
Published: (2022-05-01)

Homoeolog expression bias and expression level dominance in resynthesized allopolyploid Brassica napus
by: Jian Wu, et al.
Published: (2018-08-01)

Polyploid Induction and Karyotype Analysis of <i>Dendrobium officinale</i>
by: Yang Liu, et al.
Published: (2023-03-01)

Comparative genomic analysis of duplicated homoeologous regions involved in the resistance of Brassica napus to stem canker
by: Berline eFopa Fomeju, et al.
Published: (2015-09-01)

Allotetraploidization event of Coptis chinensis shared by all Ranunculales
by: Yan Zhang, et al.
Published: (2024-01-01)

Rapid and pervasive development- and tissue-specific homeolog expression partitioning in newly formed inter-subspecific rice segmental allotetraploids
by: Long Zhao, et al.
Published: (2018-10-01)

Symmetric subgenomes and balanced homoeolog expression stabilize the establishment of allopolyploidy in cyprinid fish
by: Li Ren, et al.
Published: (2022-09-01)

B chromosome in the beetle <it>Coprophanaeus cyanescens</it> (Scarabaeidae): emphasis in the organization of repetitive DNA sequences
by: Gomes de Oliveira Sarah, et al.
Published: (2012-11-01)

Introgression of the Aegilops speltoides Su1-Ph1 Suppressor into Wheat
by: Hao Li, et al.
Published: (2017-12-01)