Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii
This data article describes the bacterial diversity of the deep sea shark, Centroscyllium fabricii. The data was acquired by metabarcoding using 16S rDNA. Centroscyllium fabricii, a deep sea shark found at depths below 275 m was sampled during Sagar Sampada cruise no 305 in the Indian Ocean and meta...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2018-12-01
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| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340918312794 |
| _version_ | 1811310067691028480 |
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| author | Tina Kollannoor Johny Bindiya Ellathuparambil Saidumohamed Raghul Subin Sasidharan Sarita Ganapathy Bhat |
| author_facet | Tina Kollannoor Johny Bindiya Ellathuparambil Saidumohamed Raghul Subin Sasidharan Sarita Ganapathy Bhat |
| author_sort | Tina Kollannoor Johny |
| collection | DOAJ |
| description | This data article describes the bacterial diversity of the deep sea shark, Centroscyllium fabricii. The data was acquired by metabarcoding using 16S rDNA. Centroscyllium fabricii, a deep sea shark found at depths below 275 m was sampled during Sagar Sampada cruise no 305 in the Indian Ocean and metagenomic DNA was isolated from the gut contents using QIAamp DNA stool minikit. V3 region of 16S rDNA region was amplified and the amplicons were sequenced on Illumina MiSeq system using 151 bp × 2 paired end reads. The data of this metagenome is available in the BioSample Submission Portal as Bio-Project PRJNA431407and Sequence Read Archive (SRA) accession number SRR6507004. Keywords: Centroscyllium fabricii, Gut microbiota, Metagenome, Illumina |
| first_indexed | 2024-04-13T09:53:06Z |
| format | Article |
| id | doaj.art-b4678a36b069435e8dff67c88041f372 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-04-13T09:53:06Z |
| publishDate | 2018-12-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-b4678a36b069435e8dff67c88041f3722022-12-22T02:51:32ZengElsevierData in Brief2352-34092018-12-012110291032Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabriciiTina Kollannoor Johny0Bindiya Ellathuparambil Saidumohamed1Raghul Subin Sasidharan2Sarita Ganapathy Bhat3Department of Biotechnology, Cochin University of Science and Technology, Kalamassery, Cochin 682022, Kerala, IndiaDepartment of Biotechnology, Cochin University of Science and Technology, Kalamassery, Cochin 682022, Kerala, IndiaDepartment of Biotechnology, Cochin University of Science and Technology, Kalamassery, Cochin 682022, Kerala, IndiaCorresponding author.; Department of Biotechnology, Cochin University of Science and Technology, Kalamassery, Cochin 682022, Kerala, IndiaThis data article describes the bacterial diversity of the deep sea shark, Centroscyllium fabricii. The data was acquired by metabarcoding using 16S rDNA. Centroscyllium fabricii, a deep sea shark found at depths below 275 m was sampled during Sagar Sampada cruise no 305 in the Indian Ocean and metagenomic DNA was isolated from the gut contents using QIAamp DNA stool minikit. V3 region of 16S rDNA region was amplified and the amplicons were sequenced on Illumina MiSeq system using 151 bp × 2 paired end reads. The data of this metagenome is available in the BioSample Submission Portal as Bio-Project PRJNA431407and Sequence Read Archive (SRA) accession number SRR6507004. Keywords: Centroscyllium fabricii, Gut microbiota, Metagenome, Illuminahttp://www.sciencedirect.com/science/article/pii/S2352340918312794 |
| spellingShingle | Tina Kollannoor Johny Bindiya Ellathuparambil Saidumohamed Raghul Subin Sasidharan Sarita Ganapathy Bhat Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii Data in Brief |
| title | Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii |
| title_full | Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii |
| title_fullStr | Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii |
| title_full_unstemmed | Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii |
| title_short | Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii |
| title_sort | metabarcoding data of bacterial diversity of the deep sea shark centroscyllium fabricii |
| url | http://www.sciencedirect.com/science/article/pii/S2352340918312794 |
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