MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease

Abstract Chronic kidney disease can develop from kidney injury incident to chemotherapy with cisplatin, which complicates the prognosis of cancer patients. MicroRNAs regulate gene expression by pairing with specific sets of messenger RNAs. Therefore, elucidating direct physical interactions between...

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Main Authors: Hisakatsu Sone, Tae Jin Lee, Byung Rho Lee, Dan Heo, Sekyung Oh, Sang-Ho Kwon
Format: Article
Language:English
Published: Nature Portfolio 2023-11-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-43529-z
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author Hisakatsu Sone
Tae Jin Lee
Byung Rho Lee
Dan Heo
Sekyung Oh
Sang-Ho Kwon
author_facet Hisakatsu Sone
Tae Jin Lee
Byung Rho Lee
Dan Heo
Sekyung Oh
Sang-Ho Kwon
author_sort Hisakatsu Sone
collection DOAJ
description Abstract Chronic kidney disease can develop from kidney injury incident to chemotherapy with cisplatin, which complicates the prognosis of cancer patients. MicroRNAs regulate gene expression by pairing with specific sets of messenger RNAs. Therefore, elucidating direct physical interactions between microRNAs and their target messenger RNAs can help decipher crucial biological processes associated with cisplatin-induced kidney injury. Through intermolecular ligation and transcriptome-wide sequencing, we here identify direct pairs of microRNAs and their target messenger RNAs in the kidney of male mice injured by cisplatin. We find that a group of cisplatin-induced microRNAs can target select messenger RNAs that affect the mitochondrial metabolic pathways in the injured kidney. Specifically, a cisplatin-induced microRNA, miR-429-3p, suppresses the pathway that catabolizes branched-chain amino acids in the proximal tubule, leading to cell death dependent on lipid peroxidation, called ferroptosis. Identification of miRNA-429-3p-mediated ferroptosis stimulation suggests therapeutic potential for modulating the branched-chain amino acid pathway in ameliorating cisplatin-induced kidney injury.
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spelling doaj.art-b4c0c6ee54a846d494293481863c511a2023-12-03T12:27:57ZengNature PortfolioNature Communications2041-17232023-11-0114111410.1038/s41467-023-43529-zMicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney diseaseHisakatsu Sone0Tae Jin Lee1Byung Rho Lee2Dan Heo3Sekyung Oh4Sang-Ho Kwon5Department of Cellular Biology and Anatomy, Medical College of Georgia, Augusta UniversityCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Augusta UniversityDepartment of Cellular Biology and Anatomy, Medical College of Georgia, Augusta UniversityDepartment of Cellular Biology and Anatomy, Medical College of Georgia, Augusta UniversityDepartment of Medical Science, Catholic Kwandong University College of MedicineDepartment of Cellular Biology and Anatomy, Medical College of Georgia, Augusta UniversityAbstract Chronic kidney disease can develop from kidney injury incident to chemotherapy with cisplatin, which complicates the prognosis of cancer patients. MicroRNAs regulate gene expression by pairing with specific sets of messenger RNAs. Therefore, elucidating direct physical interactions between microRNAs and their target messenger RNAs can help decipher crucial biological processes associated with cisplatin-induced kidney injury. Through intermolecular ligation and transcriptome-wide sequencing, we here identify direct pairs of microRNAs and their target messenger RNAs in the kidney of male mice injured by cisplatin. We find that a group of cisplatin-induced microRNAs can target select messenger RNAs that affect the mitochondrial metabolic pathways in the injured kidney. Specifically, a cisplatin-induced microRNA, miR-429-3p, suppresses the pathway that catabolizes branched-chain amino acids in the proximal tubule, leading to cell death dependent on lipid peroxidation, called ferroptosis. Identification of miRNA-429-3p-mediated ferroptosis stimulation suggests therapeutic potential for modulating the branched-chain amino acid pathway in ameliorating cisplatin-induced kidney injury.https://doi.org/10.1038/s41467-023-43529-z
spellingShingle Hisakatsu Sone
Tae Jin Lee
Byung Rho Lee
Dan Heo
Sekyung Oh
Sang-Ho Kwon
MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease
Nature Communications
title MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease
title_full MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease
title_fullStr MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease
title_full_unstemmed MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease
title_short MicroRNA-mediated attenuation of branched-chain amino acid catabolism promotes ferroptosis in chronic kidney disease
title_sort microrna mediated attenuation of branched chain amino acid catabolism promotes ferroptosis in chronic kidney disease
url https://doi.org/10.1038/s41467-023-43529-z
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