L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients

Abstract Cystic fibrosis (CF) is caused by defects of the cystic fibrosis transmembrane conductance regulator (CFTR) gene. CFTR-modulating drugs may overcome specific defects, such as the case of Trikafta, which is a clinically approved triple combination of Elexacaftor, Tezacaftor and Ivacaftor (ET...

Full description

Bibliographic Details
Main Authors: Stefania Lo Cicero, Germana Castelli, Giovanna Blaconà, Sabina Maria Bruno, Giovanni Sette, Riccardo Pigliucci, Valeria Rachela Villella, Speranza Esposito, Immacolata Zollo, Francesca Spadaro, Ruggero De Maria, Mauro Biffoni, Giuseppe Cimino, Felice Amato, Marco Lucarelli, Adriana Eramo
Format: Article
Language:English
Published: BMC 2023-09-01
Series:Respiratory Research
Subjects:
Online Access:https://doi.org/10.1186/s12931-023-02516-0
_version_ 1827708836602970112
author Stefania Lo Cicero
Germana Castelli
Giovanna Blaconà
Sabina Maria Bruno
Giovanni Sette
Riccardo Pigliucci
Valeria Rachela Villella
Speranza Esposito
Immacolata Zollo
Francesca Spadaro
Ruggero De Maria
Mauro Biffoni
Giuseppe Cimino
Felice Amato
Marco Lucarelli
Adriana Eramo
author_facet Stefania Lo Cicero
Germana Castelli
Giovanna Blaconà
Sabina Maria Bruno
Giovanni Sette
Riccardo Pigliucci
Valeria Rachela Villella
Speranza Esposito
Immacolata Zollo
Francesca Spadaro
Ruggero De Maria
Mauro Biffoni
Giuseppe Cimino
Felice Amato
Marco Lucarelli
Adriana Eramo
author_sort Stefania Lo Cicero
collection DOAJ
description Abstract Cystic fibrosis (CF) is caused by defects of the cystic fibrosis transmembrane conductance regulator (CFTR) gene. CFTR-modulating drugs may overcome specific defects, such as the case of Trikafta, which is a clinically approved triple combination of Elexacaftor, Tezacaftor and Ivacaftor (ETI) that exhibited a strong ability to rescue the function of the most frequent F508del pathogenic variant even in genotypes with the mutated allele in single copy. Nevertheless, most rare genotypes lacking the F508del allele are still not eligible for targeted therapies. Via the innovative approach of using nasal conditionally reprogrammed cell (CRC) cell-based models that mimic patient disease in vitro, which are obtainable from each patient due to the 100% efficiency of the cell culture establishment, we theratyped orphan CFTR mutation L1077P. Protein studies, Forskolin-induced organoid swelling, and Ussing chamber assays congruently proved the L1077P variant function rescue by ETI. Notably, this rescue takes place even in the context of a single-copy L1077P allele, which appears to enhance its expression. Thus, the possibility of single-allele treatment also arises for rare genotypes, with an allele-specific modulation as part of the mechanism. Of note, besides providing indication of drug efficacy with respect to specific CFTR pathogenic variants or genotypes, this approach allows the evaluation of the response of single-patient cells within their genetic background. In this view, our studies support in vitro guided personalized CF therapies also for rare patients who are nearly excluded from clinical trials.
first_indexed 2024-03-10T17:10:27Z
format Article
id doaj.art-b4d7cae7df80409786f2da0722aa6ceb
institution Directory Open Access Journal
issn 1465-993X
language English
last_indexed 2024-03-10T17:10:27Z
publishDate 2023-09-01
publisher BMC
record_format Article
series Respiratory Research
spelling doaj.art-b4d7cae7df80409786f2da0722aa6ceb2023-11-20T10:40:48ZengBMCRespiratory Research1465-993X2023-09-0124112010.1186/s12931-023-02516-0L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patientsStefania Lo Cicero0Germana Castelli1Giovanna Blaconà2Sabina Maria Bruno3Giovanni Sette4Riccardo Pigliucci5Valeria Rachela Villella6Speranza Esposito7Immacolata Zollo8Francesca Spadaro9Ruggero De Maria10Mauro Biffoni11Giuseppe Cimino12Felice Amato13Marco Lucarelli14Adriana Eramo15Department of Oncology and Molecular Medicine, Istituto Superiore di SanitàDepartment of Oncology and Molecular Medicine, Istituto Superiore di SanitàDepartment of Experimental Medicine, Sapienza University of RomeDepartment of Experimental Medicine, Sapienza University of RomeDepartment of Oncology and Molecular Medicine, Istituto Superiore di SanitàDepartment of Oncology and Molecular Medicine, Istituto Superiore di SanitàDepartment of Molecular Medicine and Medical Biotechnologies, University of Naples Federico IIDepartment of Molecular Medicine and Medical Biotechnologies, University of Naples Federico IIDepartment of Molecular Medicine and Medical Biotechnologies, University of Naples Federico IIConfocal Microscopy Unit, Core Facilities, Istituto Superiore di SanitàDipartimento di Medicina e Chirurgia Traslazionale, Università Cattolica del Sacro CuoreDepartment of Oncology and Molecular Medicine, Istituto Superiore di SanitàCystic Fibrosis Reference Center of Lazio Region, AOU Policlinico Umberto IDepartment of Molecular Medicine and Medical Biotechnologies, University of Naples Federico IIDepartment of Experimental Medicine, Sapienza University of RomeDepartment of Oncology and Molecular Medicine, Istituto Superiore di SanitàAbstract Cystic fibrosis (CF) is caused by defects of the cystic fibrosis transmembrane conductance regulator (CFTR) gene. CFTR-modulating drugs may overcome specific defects, such as the case of Trikafta, which is a clinically approved triple combination of Elexacaftor, Tezacaftor and Ivacaftor (ETI) that exhibited a strong ability to rescue the function of the most frequent F508del pathogenic variant even in genotypes with the mutated allele in single copy. Nevertheless, most rare genotypes lacking the F508del allele are still not eligible for targeted therapies. Via the innovative approach of using nasal conditionally reprogrammed cell (CRC) cell-based models that mimic patient disease in vitro, which are obtainable from each patient due to the 100% efficiency of the cell culture establishment, we theratyped orphan CFTR mutation L1077P. Protein studies, Forskolin-induced organoid swelling, and Ussing chamber assays congruently proved the L1077P variant function rescue by ETI. Notably, this rescue takes place even in the context of a single-copy L1077P allele, which appears to enhance its expression. Thus, the possibility of single-allele treatment also arises for rare genotypes, with an allele-specific modulation as part of the mechanism. Of note, besides providing indication of drug efficacy with respect to specific CFTR pathogenic variants or genotypes, this approach allows the evaluation of the response of single-patient cells within their genetic background. In this view, our studies support in vitro guided personalized CF therapies also for rare patients who are nearly excluded from clinical trials.https://doi.org/10.1186/s12931-023-02516-0Cystic fibrosisCFTRReprogrammed nasal cellsNasal organoidsALI cultureTrikafta
spellingShingle Stefania Lo Cicero
Germana Castelli
Giovanna Blaconà
Sabina Maria Bruno
Giovanni Sette
Riccardo Pigliucci
Valeria Rachela Villella
Speranza Esposito
Immacolata Zollo
Francesca Spadaro
Ruggero De Maria
Mauro Biffoni
Giuseppe Cimino
Felice Amato
Marco Lucarelli
Adriana Eramo
L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
Respiratory Research
Cystic fibrosis
CFTR
Reprogrammed nasal cells
Nasal organoids
ALI culture
Trikafta
title L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
title_full L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
title_fullStr L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
title_full_unstemmed L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
title_short L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
title_sort l1077p cftr pathogenic variant function rescue by elexacaftor tezacaftor ivacaftor in cystic fibrosis patient derived air liquid interface ali cultures and organoids in vitro guided personalized therapy of non f508del patients
topic Cystic fibrosis
CFTR
Reprogrammed nasal cells
Nasal organoids
ALI culture
Trikafta
url https://doi.org/10.1186/s12931-023-02516-0
work_keys_str_mv AT stefanialocicero l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT germanacastelli l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT giovannablacona l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT sabinamariabruno l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT giovannisette l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT riccardopigliucci l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT valeriarachelavillella l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT speranzaesposito l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT immacolatazollo l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT francescaspadaro l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT ruggerodemaria l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT maurobiffoni l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT giuseppecimino l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT feliceamato l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT marcolucarelli l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients
AT adrianaeramo l1077pcftrpathogenicvariantfunctionrescuebyelexacaftortezacaftorivacaftorincysticfibrosispatientderivedairliquidinterfacealiculturesandorganoidsinvitroguidedpersonalizedtherapyofnonf508delpatients