The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae)
Uvaria macrophylla (Annonaceae) is an erect shrub with multiple medicinal properties. In this study, we report the complete chloroplast genome of U. macrophylla, assembled from whole-genome high-throughput sequencing reads, as a resource for future studies on the phylogeny and evolution of Annonacea...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1659108 |
| _version_ | 1827773356561137664 |
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| author | Qiaohua Wu Xiaojuan Liu Yile Chen Deyu Zhang Seping Dai |
| author_facet | Qiaohua Wu Xiaojuan Liu Yile Chen Deyu Zhang Seping Dai |
| author_sort | Qiaohua Wu |
| collection | DOAJ |
| description | Uvaria macrophylla (Annonaceae) is an erect shrub with multiple medicinal properties. In this study, we report the complete chloroplast genome of U. macrophylla, assembled from whole-genome high-throughput sequencing reads, as a resource for future studies on the phylogeny and evolution of Annonaceae. The chloroplast genome was 192,782 bp in length, with a large single-copy (LSC) region of 83,581 bp, a small single-copy (SSC) region of 3,741 bp, separated by two inverted repeat (IR) regions of 52,730 bp each. It was predicted to contain 151 genes, with an overall GC content of 38.7%. Phylogenetic analysis of 105 protein-coding sequences of 13 plant plastomes showed that U. macrophylla is closest to Annona cherimola. |
| first_indexed | 2024-03-11T13:21:50Z |
| format | Article |
| id | doaj.art-b53f4cbb35eb41449e68271f9f2c1379 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:21:50Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b53f4cbb35eb41449e68271f9f2c13792023-11-03T10:28:36ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01423012301310.1080/23802359.2019.16591081659108The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae)Qiaohua Wu0Xiaojuan Liu1Yile Chen2Deyu Zhang3Seping Dai4Guangzhou Institute of Forestry and Landscape ArchitectureLandscaping company of GuangzhouThe Affiliated Taihe Experimental School of South China Normal UniversityXia Mao Elementary SchoolGuangzhou Institute of Forestry and Landscape ArchitectureUvaria macrophylla (Annonaceae) is an erect shrub with multiple medicinal properties. In this study, we report the complete chloroplast genome of U. macrophylla, assembled from whole-genome high-throughput sequencing reads, as a resource for future studies on the phylogeny and evolution of Annonaceae. The chloroplast genome was 192,782 bp in length, with a large single-copy (LSC) region of 83,581 bp, a small single-copy (SSC) region of 3,741 bp, separated by two inverted repeat (IR) regions of 52,730 bp each. It was predicted to contain 151 genes, with an overall GC content of 38.7%. Phylogenetic analysis of 105 protein-coding sequences of 13 plant plastomes showed that U. macrophylla is closest to Annona cherimola.http://dx.doi.org/10.1080/23802359.2019.1659108uvaria macrophyllacomplete chloroplast genomeautomated assemblyphylogenetic analysis |
| spellingShingle | Qiaohua Wu Xiaojuan Liu Yile Chen Deyu Zhang Seping Dai The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae) Mitochondrial DNA. Part B. Resources uvaria macrophylla complete chloroplast genome automated assembly phylogenetic analysis |
| title | The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae) |
| title_full | The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae) |
| title_fullStr | The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae) |
| title_full_unstemmed | The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae) |
| title_short | The complete chloroplast genome of Uvaria macrophylla Roxb. (Annonaceae) |
| title_sort | complete chloroplast genome of uvaria macrophylla roxb annonaceae |
| topic | uvaria macrophylla complete chloroplast genome automated assembly phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1659108 |
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