Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector

ABSTRACT Many Gram-negative bacteria deploy a type VI secretion system (T6SS) to inject toxins into target cells to promote their survival and replication in complex environments. Here, we report that Acinetobacter baumannii uses its T6SS to kill fungi and that the effector TafE (ACX60_15365) is res...

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Main Authors: Jingjing Luo, Xiao Chu, Jing Jie, Yu Sun, Qingtian Guan, Dan Li, Zhao-Qing Luo, Lei Song
Format: Article
Language:English
Published: American Society for Microbiology 2023-02-01
Series:mBio
Subjects:
Online Access:https://journals.asm.org/doi/10.1128/mbio.03420-22
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author Jingjing Luo
Xiao Chu
Jing Jie
Yu Sun
Qingtian Guan
Dan Li
Zhao-Qing Luo
Lei Song
author_facet Jingjing Luo
Xiao Chu
Jing Jie
Yu Sun
Qingtian Guan
Dan Li
Zhao-Qing Luo
Lei Song
author_sort Jingjing Luo
collection DOAJ
description ABSTRACT Many Gram-negative bacteria deploy a type VI secretion system (T6SS) to inject toxins into target cells to promote their survival and replication in complex environments. Here, we report that Acinetobacter baumannii uses its T6SS to kill fungi and that the effector TafE (ACX60_15365) is responsible for such killing. Although ectopically expressed TafE is toxic to both Escherichia coli and Saccharomyces cerevisiae, deletion of tafE only affects the antifungal activity of A. baumannii. We demonstrate that TafE is a DNase capable of targeting the nuclei of yeast cells and that an Ntox15 domain is essential for its ability to degrade DNA. Furthermore, our findings show that A. baumannii is protected from the toxicity of TafE by elaborating the immunity protein TaeI (ACX60_15360), which antagonizes the activity of the effector by direct binding. The discovery of A. baumannii T6SS effectors capable of killing multiple taxonomically distinct microbes has shed light on a mechanism of the high-level fitness of this pathogen in environments characterized by scarce nutrients and the potential presence of diverse microorganisms. IMPORTANCE Acinetobacter baumannii is an increasing important nosocomial pathogen that is difficult to combat due to its ability to survive in harsh environments and the emergence of isolates that are resistant to multiple antibiotics. A better understanding of the mechanism underlying the toughness of A. baumannii may identify its Achilles’ heel, which will facilitate the development of novel preventive and treatment measures. In this study, our findings show that A. baumannii kills fungi with the DNase effector TafE injected into competitor cells by its type VI secretion system. A. baumannii is protected from the activity of TafE by the immunity protein TaeI, which inactivates the effector by direct binding. Our results suggest that inactivation of its T6SS or effectors may reduce the fitness of A. baumannii and increase the effectiveness of treatment by means such as antibiotics. Furthermore, our finding suggests that targeted degradation of TaeI may be an effective strategy to kill A. baumannii.
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spelling doaj.art-b58dd343246d489b974d28cc21a6b7322023-02-28T14:06:25ZengAmerican Society for MicrobiologymBio2150-75112023-02-0114110.1128/mbio.03420-22Acinetobacter baumannii Kills Fungi via a Type VI DNase EffectorJingjing Luo0Xiao Chu1Jing Jie2Yu Sun3Qingtian Guan4Dan Li5Zhao-Qing Luo6Lei Song7Department of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, ChinaDepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, ChinaDepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, ChinaThe First Hospital of Jilin University, Changchun, ChinaThe First Hospital of Jilin University, Changchun, ChinaDepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, ChinaDepartment of Biological Sciences, Purdue University, West Lafayette, Indiana, USADepartment of Respiratory Medicine, Center for Infectious Diseases and Pathogen Biology, Key Laboratory of Organ Regeneration and Transplantation of the Ministry of Education, State Key Laboratory for Zoonotic Diseases, The First Hospital of Jilin University, Changchun, ChinaABSTRACT Many Gram-negative bacteria deploy a type VI secretion system (T6SS) to inject toxins into target cells to promote their survival and replication in complex environments. Here, we report that Acinetobacter baumannii uses its T6SS to kill fungi and that the effector TafE (ACX60_15365) is responsible for such killing. Although ectopically expressed TafE is toxic to both Escherichia coli and Saccharomyces cerevisiae, deletion of tafE only affects the antifungal activity of A. baumannii. We demonstrate that TafE is a DNase capable of targeting the nuclei of yeast cells and that an Ntox15 domain is essential for its ability to degrade DNA. Furthermore, our findings show that A. baumannii is protected from the toxicity of TafE by elaborating the immunity protein TaeI (ACX60_15360), which antagonizes the activity of the effector by direct binding. The discovery of A. baumannii T6SS effectors capable of killing multiple taxonomically distinct microbes has shed light on a mechanism of the high-level fitness of this pathogen in environments characterized by scarce nutrients and the potential presence of diverse microorganisms. IMPORTANCE Acinetobacter baumannii is an increasing important nosocomial pathogen that is difficult to combat due to its ability to survive in harsh environments and the emergence of isolates that are resistant to multiple antibiotics. A better understanding of the mechanism underlying the toughness of A. baumannii may identify its Achilles’ heel, which will facilitate the development of novel preventive and treatment measures. In this study, our findings show that A. baumannii kills fungi with the DNase effector TafE injected into competitor cells by its type VI secretion system. A. baumannii is protected from the activity of TafE by the immunity protein TaeI, which inactivates the effector by direct binding. Our results suggest that inactivation of its T6SS or effectors may reduce the fitness of A. baumannii and increase the effectiveness of treatment by means such as antibiotics. Furthermore, our finding suggests that targeted degradation of TaeI may be an effective strategy to kill A. baumannii.https://journals.asm.org/doi/10.1128/mbio.03420-22type VI secretion systemanti-fungal effectorinterkingdom competitionpolymicrobial niches
spellingShingle Jingjing Luo
Xiao Chu
Jing Jie
Yu Sun
Qingtian Guan
Dan Li
Zhao-Qing Luo
Lei Song
Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector
mBio
type VI secretion system
anti-fungal effector
interkingdom competition
polymicrobial niches
title Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector
title_full Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector
title_fullStr Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector
title_full_unstemmed Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector
title_short Acinetobacter baumannii Kills Fungi via a Type VI DNase Effector
title_sort acinetobacter baumannii kills fungi via a type vi dnase effector
topic type VI secretion system
anti-fungal effector
interkingdom competition
polymicrobial niches
url https://journals.asm.org/doi/10.1128/mbio.03420-22
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