Biochemical Diversity, Pathogenicity and Phylogenetic Analysis of <i>Pseudomonas viridiflava</i> from Bean and Weeds in Northern Spain

<i>Pseudomonas viridiflava</i> was originally reported as a bean pathogen, and subsequently as a wide-host range pathogen affecting numerous plants species. In addition, several authors have reported the epiphytic presence of this bacterium in “non-host plants”, which may act as reservoi...

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Bibliographic Details
Main Authors: Ana M. Fernández-Sanz, M. Rosario Rodicio, Ana J. González
Format: Article
Language:English
Published: MDPI AG 2022-07-01
Series:Microorganisms
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Online Access:https://www.mdpi.com/2076-2607/10/8/1542
Description
Summary:<i>Pseudomonas viridiflava</i> was originally reported as a bean pathogen, and subsequently as a wide-host range pathogen affecting numerous plants species. In addition, several authors have reported the epiphytic presence of this bacterium in “non-host plants”, which may act as reservoir of <i>P. viridiflava</i> and source of inoculum for crops. A new biotype of this bacterium, showing an atypical LOPAT profile, was found in Asturias, a Northern region of Spain, causing significant damage in beans, kiwifruit, lettuce, and <i>Hebe</i>. In order to investigate the involvement of weeds in bean disease, samples were collected from beans and weeds growing in the same fields. A total of 48 isolates of <i>P. viridiflava</i> were obtained, 39 from weeds and 9 from beans. 48% and 52% of them showed typical (L− O− P+ A− T+) and atypical (L+ O− P v A− T+) LOPAT profiles, and they displayed high biochemical diversity. Regarding virulence factors, the T-PAI and S-PAI pathogenicity islands were found in 29% and 70.8% of the isolates, 81.2% displayed pectinolytic activity on potato slices, and 59% of the weed isolates produced symptoms after inoculation on bean pods. A phylogenetic tree based on concatenated <i>rpoD</i>, <i>gyrB</i>, and <i>gltA</i> sequences separated the strains carrying S-PAI and T-PAI into different clusters, both containing isolates from beans and weeds, and pathogenic as well as non-pathogenic strains. Closely related strains were found in the two hosts, and more than half of the weed isolates proved to be pathogenic in beans. This is consistent with the role of weeds as a reservoir and source of inoculum for bean infection. Detection of <i>P. viridiflava</i> in weeds throughout the year further supports these roles.
ISSN:2076-2607