An integrated approach to identifying cis-regulatory modules in the human genome.
In eukaryotic genomes, it is challenging to accurately determine target sites of transcription factors (TFs) by only using sequence information. Previous efforts were made to tackle this task by considering the fact that TF binding sites tend to be more conserved than other functional sites and the...
Main Authors: | Kyoung-Jae Won, Saurabh Agarwal, Li Shen, Robert Shoemaker, Bing Ren, Wei Wang |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2009-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC2677454?pdf=render |
Similar Items
-
CisMiner: genome-wide in-silico cis-regulatory module prediction by fuzzy itemset mining.
by: Carmen Navarro, et al.
Published: (2014-01-01) -
Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila
by: Gaul Ulrike, et al.
Published: (2004-09-01) -
Statistical significance of cis-regulatory modules
by: Smith Andrew D, et al.
Published: (2007-01-01) -
Alignment and prediction of cis-regulatory modules based on a probabilistic model of evolution.
by: Xin He, et al.
Published: (2009-03-01) -
Predicting tissue specific cis-regulatory modules in the human genome using pairs of co-occurring motifs
by: Girgis Hani Z, et al.
Published: (2012-02-01)