Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds

The growing antimicrobial resistance (AMR) of pathogenic organisms to currently prescribed drugs has resulted in the failure to treat various infections caused by these superbugs. Therefore, to keep pace with the increasing drug resistance, there is a pressing need for novel antimicrobial agents, es...

Full description

Bibliographic Details
Main Authors: Samson Olaitan Oselusi, Alan Christoffels, Samuel Ayodele Egieyeh
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Molecules
Subjects:
Online Access:https://www.mdpi.com/1420-3049/26/13/3970
_version_ 1797411517347397632
author Samson Olaitan Oselusi
Alan Christoffels
Samuel Ayodele Egieyeh
author_facet Samson Olaitan Oselusi
Alan Christoffels
Samuel Ayodele Egieyeh
author_sort Samson Olaitan Oselusi
collection DOAJ
description The growing antimicrobial resistance (AMR) of pathogenic organisms to currently prescribed drugs has resulted in the failure to treat various infections caused by these superbugs. Therefore, to keep pace with the increasing drug resistance, there is a pressing need for novel antimicrobial agents, especially from non-conventional sources. Several natural products (NPs) have been shown to display promising in vitro activities against multidrug-resistant pathogens. Still, only a few of these compounds have been studied as prospective drug candidates. This may be due to the expensive and time-consuming process of conducting important studies on these compounds. The present review focuses on applying cheminformatics strategies to characterize, prioritize, and optimize NPs to develop new lead compounds against antimicrobial resistance pathogens. Moreover, case studies where these strategies have been used to identify potential drug candidates, including a few selected open-access tools commonly used for these studies, are briefly outlined.
first_indexed 2024-03-09T04:47:13Z
format Article
id doaj.art-b6af55143d1e44afa045d2a417eb66e3
institution Directory Open Access Journal
issn 1420-3049
language English
last_indexed 2024-03-09T04:47:13Z
publishDate 2021-06-01
publisher MDPI AG
record_format Article
series Molecules
spelling doaj.art-b6af55143d1e44afa045d2a417eb66e32023-12-03T13:14:52ZengMDPI AGMolecules1420-30492021-06-012613397010.3390/molecules26133970Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead CompoundsSamson Olaitan Oselusi0Alan Christoffels1Samuel Ayodele Egieyeh2School of Pharmacy, University of the Western Cape, Bellville, Cape Town 7535, South AfricaSouth African Medical Research Council Bioinformatics Unit, South African National Bioinformatics Institute, University of the Western Cape, Cape Town 7535, South AfricaSchool of Pharmacy, University of the Western Cape, Bellville, Cape Town 7535, South AfricaThe growing antimicrobial resistance (AMR) of pathogenic organisms to currently prescribed drugs has resulted in the failure to treat various infections caused by these superbugs. Therefore, to keep pace with the increasing drug resistance, there is a pressing need for novel antimicrobial agents, especially from non-conventional sources. Several natural products (NPs) have been shown to display promising in vitro activities against multidrug-resistant pathogens. Still, only a few of these compounds have been studied as prospective drug candidates. This may be due to the expensive and time-consuming process of conducting important studies on these compounds. The present review focuses on applying cheminformatics strategies to characterize, prioritize, and optimize NPs to develop new lead compounds against antimicrobial resistance pathogens. Moreover, case studies where these strategies have been used to identify potential drug candidates, including a few selected open-access tools commonly used for these studies, are briefly outlined.https://www.mdpi.com/1420-3049/26/13/3970antimicrobial resistancenatural productscheminformaticshit prioritizationhit-optimizationdrug-likeness
spellingShingle Samson Olaitan Oselusi
Alan Christoffels
Samuel Ayodele Egieyeh
Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds
Molecules
antimicrobial resistance
natural products
cheminformatics
hit prioritization
hit-optimization
drug-likeness
title Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds
title_full Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds
title_fullStr Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds
title_full_unstemmed Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds
title_short Cheminformatic Characterization of Natural Antimicrobial Products for the Development of New Lead Compounds
title_sort cheminformatic characterization of natural antimicrobial products for the development of new lead compounds
topic antimicrobial resistance
natural products
cheminformatics
hit prioritization
hit-optimization
drug-likeness
url https://www.mdpi.com/1420-3049/26/13/3970
work_keys_str_mv AT samsonolaitanoselusi cheminformaticcharacterizationofnaturalantimicrobialproductsforthedevelopmentofnewleadcompounds
AT alanchristoffels cheminformaticcharacterizationofnaturalantimicrobialproductsforthedevelopmentofnewleadcompounds
AT samuelayodeleegieyeh cheminformaticcharacterizationofnaturalantimicrobialproductsforthedevelopmentofnewleadcompounds