The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb
Epimedium wushanense is a well-known medicinal plant in Berberidaceae in China. In this study, we sequenced the complete chloroplast (cp) genome of E. wushanense. The results showed that the cp genome of E. wushanense was 157,283 bp in length, which is composed of a large single-copy region (LSC, 88...
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| Format: | Article |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1715877 |
| _version_ | 1797639437991018496 |
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| author | Ting Liu Xiang Liu Yanjiao Luo Yu Yao Chunmei Wen Qianru Yang Guoan Shen Baolin Guo |
| author_facet | Ting Liu Xiang Liu Yanjiao Luo Yu Yao Chunmei Wen Qianru Yang Guoan Shen Baolin Guo |
| author_sort | Ting Liu |
| collection | DOAJ |
| description | Epimedium wushanense is a well-known medicinal plant in Berberidaceae in China. In this study, we sequenced the complete chloroplast (cp) genome of E. wushanense. The results showed that the cp genome of E. wushanense was 157,283 bp in length, which is composed of a large single-copy region (LSC, 88,579 bp) and a small single-copy region (SSC, 17,082 bp) that were separated by a pair of inverted repeat regions (IRa and IRb, 25,811 bp). The chloroplast genome of E. wushanense contains 112 unique genes, of which are 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content was 38.78%. The phylogenetic tree analysis showed that E. wushanense was closely related to E. pseudowushanense, E. lishihchenii, and E. sagittatum. |
| first_indexed | 2024-03-11T13:17:53Z |
| format | Article |
| id | doaj.art-b783e27f9abf4595bf17ac516992973a |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:53Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b783e27f9abf4595bf17ac516992973a2023-11-03T11:00:21ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015181781810.1080/23802359.2020.17158771715877The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herbTing Liu0Xiang Liu1Yanjiao Luo2Yu Yao3Chunmei Wen4Qianru Yang5Guoan Shen6Baolin Guo7College of Traditional Chinese Medicine, Shanxi University of Chinese MedicineInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeInstitute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical CollegeEpimedium wushanense is a well-known medicinal plant in Berberidaceae in China. In this study, we sequenced the complete chloroplast (cp) genome of E. wushanense. The results showed that the cp genome of E. wushanense was 157,283 bp in length, which is composed of a large single-copy region (LSC, 88,579 bp) and a small single-copy region (SSC, 17,082 bp) that were separated by a pair of inverted repeat regions (IRa and IRb, 25,811 bp). The chloroplast genome of E. wushanense contains 112 unique genes, of which are 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall GC content was 38.78%. The phylogenetic tree analysis showed that E. wushanense was closely related to E. pseudowushanense, E. lishihchenii, and E. sagittatum.http://dx.doi.org/10.1080/23802359.2020.1715877chloroplast genomeepimedium wushanenseberberidaceae |
| spellingShingle | Ting Liu Xiang Liu Yanjiao Luo Yu Yao Chunmei Wen Qianru Yang Guoan Shen Baolin Guo The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb Mitochondrial DNA. Part B. Resources chloroplast genome epimedium wushanense berberidaceae |
| title | The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb |
| title_full | The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb |
| title_fullStr | The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb |
| title_full_unstemmed | The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb |
| title_short | The complete chloroplast genome of Epimedium wushanense T. S. Ying. (Berberidaceae), a traditional Chinese medicinal herb |
| title_sort | complete chloroplast genome of epimedium wushanense t s ying berberidaceae a traditional chinese medicinal herb |
| topic | chloroplast genome epimedium wushanense berberidaceae |
| url | http://dx.doi.org/10.1080/23802359.2020.1715877 |
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