Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing
The complete mitochondrial genome (mitogenome) of Opisthotropis andersonii was first determined using illumina next-generation sequencing. The total length of genome was 18,297bp with a slightly AT bias (59.57%), and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, 2 control regions,...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1565927 |
| _version_ | 1827774077886005248 |
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| author | Liang Zhang Haiying Jiang Linmiao Li Jinping Chen |
| author_facet | Liang Zhang Haiying Jiang Linmiao Li Jinping Chen |
| author_sort | Liang Zhang |
| collection | DOAJ |
| description | The complete mitochondrial genome (mitogenome) of Opisthotropis andersonii was first determined using illumina next-generation sequencing. The total length of genome was 18,297bp with a slightly AT bias (59.57%), and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, 2 control regions, and an origin of light-strand replication. All genes are distributed on the H-strand, except ND6 gene. A phylogenetic tree was constructed based on the 13 PCG sequences of O. andersonii and other related snakes to analyze their phylogenic relationship, exhibiting the closest relationship with Thermophis baileyi and Nerodia sipedon. |
| first_indexed | 2024-03-11T13:32:46Z |
| format | Article |
| id | doaj.art-b7cea62698194b419701d7be136f3a3b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:32:46Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b7cea62698194b419701d7be136f3a3b2023-11-02T16:07:25ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411012101310.1080/23802359.2019.15659271565927Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencingLiang Zhang0Haiying Jiang1Linmiao Li2Jinping Chen3Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Guangdong Institute of Applied Biological ResourcesGuangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Guangdong Institute of Applied Biological ResourcesGuangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Guangdong Institute of Applied Biological ResourcesGuangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Guangdong Institute of Applied Biological ResourcesThe complete mitochondrial genome (mitogenome) of Opisthotropis andersonii was first determined using illumina next-generation sequencing. The total length of genome was 18,297bp with a slightly AT bias (59.57%), and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, 2 control regions, and an origin of light-strand replication. All genes are distributed on the H-strand, except ND6 gene. A phylogenetic tree was constructed based on the 13 PCG sequences of O. andersonii and other related snakes to analyze their phylogenic relationship, exhibiting the closest relationship with Thermophis baileyi and Nerodia sipedon.http://dx.doi.org/10.1080/23802359.2019.1565927mitochondrial genomeopisthotropis andersoniiphylogenic relationship |
| spellingShingle | Liang Zhang Haiying Jiang Linmiao Li Jinping Chen Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing Mitochondrial DNA. Part B. Resources mitochondrial genome opisthotropis andersonii phylogenic relationship |
| title | Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing |
| title_full | Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing |
| title_fullStr | Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing |
| title_full_unstemmed | Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing |
| title_short | Complete mitochondrial genome of Opisthotropis andersonii (Serpentes: Colubridae) determined using next-generation sequencing |
| title_sort | complete mitochondrial genome of opisthotropis andersonii serpentes colubridae determined using next generation sequencing |
| topic | mitochondrial genome opisthotropis andersonii phylogenic relationship |
| url | http://dx.doi.org/10.1080/23802359.2019.1565927 |
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