Epigenetic management of self and non-self: lessons from 40 years of transgenic plants

Plant varieties exhibiting unstable or variegated phenotypes, or showing virus recovery have long remained a mystery. It is only with the development of transgenic plants 40 years ago that the epigenetic features underlying these phenomena were elucidated. Indeed, the study of transgenic plants that...

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Main Author: Vaucheret, Hervé
Format: Article
Language:English
Published: Académie des sciences 2022-12-01
Series:Comptes Rendus Biologies
Subjects:
Online Access:https://comptes-rendus.academie-sciences.fr/biologies/articles/10.5802/crbiol.96/
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author Vaucheret, Hervé
author_facet Vaucheret, Hervé
author_sort Vaucheret, Hervé
collection DOAJ
description Plant varieties exhibiting unstable or variegated phenotypes, or showing virus recovery have long remained a mystery. It is only with the development of transgenic plants 40 years ago that the epigenetic features underlying these phenomena were elucidated. Indeed, the study of transgenic plants that did not express the introduced sequences revealed that transgene loci sometimes undergo transcriptional gene silencing (TGS) or post-transcriptional gene silencing (PTGS) by activating epigenetic defenses that naturally control transposable elements, duplicated genes or viruses. Even when they do not trigger TGS or PTGS spontaneously, stably expressed transgenes driven by viral promoters set apart from endogenous genes in their epigenetic regulation. As a result, transgenes driven by viral promoters are capable of undergoing systemic PTGS throughout the plant, whereas endogenous genes can only undergo local PTGS in cells where RNA quality control is impaired. Together, these results indicate that the host genome distinguishes self from non-self at the epigenetic level, allowing PTGS to eliminate non-self, and preventing PTGS to become systemic and kill the plant when it is locally activated against deregulated self.
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spelling doaj.art-b891ea09194c4cb79fe82dbaf5975e632023-10-24T14:25:33ZengAcadémie des sciencesComptes Rendus Biologies1768-32382022-12-01345414917410.5802/crbiol.9610.5802/crbiol.96Epigenetic management of self and non-self: lessons from 40 years of transgenic plantsVaucheret, Hervé0https://orcid.org/0000-0002-9986-0988Institut Jean-Pierre Bourgin, INRAE, AgroParisTech, Université Paris-Saclay, RD10, 78000 Versailles, FrancePlant varieties exhibiting unstable or variegated phenotypes, or showing virus recovery have long remained a mystery. It is only with the development of transgenic plants 40 years ago that the epigenetic features underlying these phenomena were elucidated. Indeed, the study of transgenic plants that did not express the introduced sequences revealed that transgene loci sometimes undergo transcriptional gene silencing (TGS) or post-transcriptional gene silencing (PTGS) by activating epigenetic defenses that naturally control transposable elements, duplicated genes or viruses. Even when they do not trigger TGS or PTGS spontaneously, stably expressed transgenes driven by viral promoters set apart from endogenous genes in their epigenetic regulation. As a result, transgenes driven by viral promoters are capable of undergoing systemic PTGS throughout the plant, whereas endogenous genes can only undergo local PTGS in cells where RNA quality control is impaired. Together, these results indicate that the host genome distinguishes self from non-self at the epigenetic level, allowing PTGS to eliminate non-self, and preventing PTGS to become systemic and kill the plant when it is locally activated against deregulated self.https://comptes-rendus.academie-sciences.fr/biologies/articles/10.5802/crbiol.96/VirusesEpigeneticsGene silencingRNA quality controlTransgenesTransposonsViruses
spellingShingle Vaucheret, Hervé
Epigenetic management of self and non-self: lessons from 40 years of transgenic plants
Comptes Rendus Biologies
Viruses
Epigenetics
Gene silencing
RNA quality control
Transgenes
Transposons
Viruses
title Epigenetic management of self and non-self: lessons from 40 years of transgenic plants
title_full Epigenetic management of self and non-self: lessons from 40 years of transgenic plants
title_fullStr Epigenetic management of self and non-self: lessons from 40 years of transgenic plants
title_full_unstemmed Epigenetic management of self and non-self: lessons from 40 years of transgenic plants
title_short Epigenetic management of self and non-self: lessons from 40 years of transgenic plants
title_sort epigenetic management of self and non self lessons from 40 years of transgenic plants
topic Viruses
Epigenetics
Gene silencing
RNA quality control
Transgenes
Transposons
Viruses
url https://comptes-rendus.academie-sciences.fr/biologies/articles/10.5802/crbiol.96/
work_keys_str_mv AT vaucheretherve epigeneticmanagementofselfandnonselflessonsfrom40yearsoftransgenicplants