The K-mer antibiotic resistance gene variant analyzer (KARGVA)

The K-mer antibiotic resistance gene variant analyzer (KARGVA)

Characterization of antibiotic resistance genes (ARGs) from high-throughput sequencing data of metagenomics and cultured bacterial samples is a challenging task, with the need to account for both computational (e.g., string algorithms) and biological (e.g., gene transfers, rearrangements) aspects. C...

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Bibliographic Details
Main Authors: Simone Marini, Christina Boucher, Noelle Noyes, Mattia Prosperi
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-03-01
Series:Frontiers in Microbiology
Subjects:
antibiotic resistance
gene variants
metagenomics
high-throughput sequencing
bioinformatics
statistical learning
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2023.1060891/full

Internet

https://www.frontiersin.org/articles/10.3389/fmicb.2023.1060891/full

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