Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics

Background: The gut microbiome (GMB) generates numerous small chemicals that can be absorbed by the host and variously biotransformed, incorporated, or excreted. The resulting metabolome can provide information about the state of the GMB, of the host, and of their relationship. Exploiting this info...

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Main Authors: George Eugene Jaskiw, Mark E. Obrenovich, Sirisha Kundrapu, Curtis J. Donskey
Format: Article
Language:English
Published: Case Western Reserve University 2020-12-01
Series:Pathogens and Immunity
Subjects:
Online Access:https://www.paijournal.com/index.php/paijournal/article/view/394
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author George Eugene Jaskiw
Mark E. Obrenovich
Sirisha Kundrapu
Curtis J. Donskey
author_facet George Eugene Jaskiw
Mark E. Obrenovich
Sirisha Kundrapu
Curtis J. Donskey
author_sort George Eugene Jaskiw
collection DOAJ
description Background: The gut microbiome (GMB) generates numerous small chemicals that can be absorbed by the host and variously biotransformed, incorporated, or excreted. The resulting metabolome can provide information about the state of the GMB, of the host, and of their relationship. Exploiting this information in the service of biomarker development is contingent on knowing the GMB-sensitivity of the individual chemicals comprising the metabolome. In this regard, human studies have lagged far behind animal studies. Accordingly, we tested the hypothesis that serum levels of chemicals unequivocally demonstrated to be GMB-sensitive in rodent models would also be affected in a clinical patient sample treated with broad spectrum antibiotics. Methods: We collected serum samples from 20 hospitalized patients before, during, and after treatment with broad-spectrum antibiotics. We also collected samples from 5 control patients admitted to the hospital but not prescribed antibiotics. We submitted the samples for a non-targeted metabolomic analysis and then focused on chemicals known to be affected both by germ-free status and by antibiotic treatment in the mouse and/or rat. Results: Putative identification was obtained for 499 chemicals in human serum. An aggregate analysis did not show any time x treatment interactions. However, our literature search identified 10 serum chemicals affected both by germ-free status and antibiotic treatment in the mouse or rat. Six of those chemicals were measured in our patient samples and additionally met criteria for inclusion in a focused analysis. Serum levels of 5 chemicals (p-cresol sulfate, phenol sulfate, hippurate, indole propionate, and indoxyl sulfate) declined significantly in our group of antibiotic-treated patients but did not change in our patient control group. Conclusions: Broad-spectrum antibiotic treatment in patients lowered serum levels of selected chemicals previously demonstrated to be GMB-sensitive in rodent models. Interestingly, all those chemicals are known to be uremic solutes that can be derived from aromatic amino acids (L-phenylalanine, L-tyrosine, or L-tryptophan) by anaerobic bacteria, particularly Clostridial species. We conclude that judiciously selected serum chemicals can reliably detect antibiotic-induced suppression of the GMB in man and thus facilitate further metabolome-based biomarker development.
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spelling doaj.art-b8f45f96ec8642ebb0d44ed7f310f4ec2022-12-22T01:37:57ZengCase Western Reserve UniversityPathogens and Immunity2469-29642020-12-015110.20411/pai.v5i1.394Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum AntibioticsGeorge Eugene Jaskiw0Mark E. Obrenovich1Sirisha Kundrapu2Curtis J. Donskey3Veterans Affairs Northeast Ohio Healthcare System, Case Western Reserve University School of MedicinePathology and Laboratory Medicine Service, VANEOHS, Cleveland, Ohio; Research Service, VANEOHS, Cleveland, Ohio; Department of Chemistry, Case Western Reserve University, Cleveland, OhioSchool of Medicine, Case Western Reserve University, Cleveland, OhioSchool of Medicine, Case Western Reserve University, Cleveland, Ohio; Geriatric Research, Education and Clinical Center, VANEOHS, Cleveland, Ohio Background: The gut microbiome (GMB) generates numerous small chemicals that can be absorbed by the host and variously biotransformed, incorporated, or excreted. The resulting metabolome can provide information about the state of the GMB, of the host, and of their relationship. Exploiting this information in the service of biomarker development is contingent on knowing the GMB-sensitivity of the individual chemicals comprising the metabolome. In this regard, human studies have lagged far behind animal studies. Accordingly, we tested the hypothesis that serum levels of chemicals unequivocally demonstrated to be GMB-sensitive in rodent models would also be affected in a clinical patient sample treated with broad spectrum antibiotics. Methods: We collected serum samples from 20 hospitalized patients before, during, and after treatment with broad-spectrum antibiotics. We also collected samples from 5 control patients admitted to the hospital but not prescribed antibiotics. We submitted the samples for a non-targeted metabolomic analysis and then focused on chemicals known to be affected both by germ-free status and by antibiotic treatment in the mouse and/or rat. Results: Putative identification was obtained for 499 chemicals in human serum. An aggregate analysis did not show any time x treatment interactions. However, our literature search identified 10 serum chemicals affected both by germ-free status and antibiotic treatment in the mouse or rat. Six of those chemicals were measured in our patient samples and additionally met criteria for inclusion in a focused analysis. Serum levels of 5 chemicals (p-cresol sulfate, phenol sulfate, hippurate, indole propionate, and indoxyl sulfate) declined significantly in our group of antibiotic-treated patients but did not change in our patient control group. Conclusions: Broad-spectrum antibiotic treatment in patients lowered serum levels of selected chemicals previously demonstrated to be GMB-sensitive in rodent models. Interestingly, all those chemicals are known to be uremic solutes that can be derived from aromatic amino acids (L-phenylalanine, L-tyrosine, or L-tryptophan) by anaerobic bacteria, particularly Clostridial species. We conclude that judiciously selected serum chemicals can reliably detect antibiotic-induced suppression of the GMB in man and thus facilitate further metabolome-based biomarker development. https://www.paijournal.com/index.php/paijournal/article/view/394serummetabolomeantibioticL-tyrosineL-phenylalanineL-tryptophan
spellingShingle George Eugene Jaskiw
Mark E. Obrenovich
Sirisha Kundrapu
Curtis J. Donskey
Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics
Pathogens and Immunity
serum
metabolome
antibiotic
L-tyrosine
L-phenylalanine
L-tryptophan
title Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics
title_full Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics
title_fullStr Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics
title_full_unstemmed Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics
title_short Changes in the Serum Metabolome of Patients Treated With Broad-Spectrum Antibiotics
title_sort changes in the serum metabolome of patients treated with broad spectrum antibiotics
topic serum
metabolome
antibiotic
L-tyrosine
L-phenylalanine
L-tryptophan
url https://www.paijournal.com/index.php/paijournal/article/view/394
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AT markeobrenovich changesintheserummetabolomeofpatientstreatedwithbroadspectrumantibiotics
AT sirishakundrapu changesintheserummetabolomeofpatientstreatedwithbroadspectrumantibiotics
AT curtisjdonskey changesintheserummetabolomeofpatientstreatedwithbroadspectrumantibiotics