The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines
‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, Unive...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2144515 |
| _version_ | 1797638524636233728 |
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| author | R. E. Madayag R. Jr. P. Gentallan K. J. O. Quiñones M. C. B. Bartolome J. R. A. Vera Cruz T. H. Borromeo L. E. Endonela E. B. S. Timog |
| author_facet | R. E. Madayag R. Jr. P. Gentallan K. J. O. Quiñones M. C. B. Bartolome J. R. A. Vera Cruz T. H. Borromeo L. E. Endonela E. B. S. Timog |
| author_sort | R. E. Madayag |
| collection | DOAJ |
| description | ‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, University of the Philippines Los Baños. The complete chloroplast (cp) genome sequence is 159,928-bp long with 128 coding genes comprising 83 mRNA genes, 37 tRNA genes, and eight rRNA genes. Out of the mRNA genes, 45 genes code for photosynthesis, 30 genes code for self-replication, and five genes code for other functions. A phylogenetic analysis of the assembled genome, along with 24 Citrus species and three other Rutaceae species, identified Citrus aurantiifolia as its closest relative with available complete cpDNA sequence. |
| first_indexed | 2024-03-11T13:04:51Z |
| format | Article |
| id | doaj.art-b91f63df1a3747f6a405e7d9fab59153 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:04:51Z |
| publishDate | 2022-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-b91f63df1a3747f6a405e7d9fab591532023-11-03T14:44:05ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-11-017111992199610.1080/23802359.2022.21445152144515The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern PhilippinesR. E. Madayag0R. Jr. P. Gentallan1K. J. O. Quiñones2M. C. B. Bartolome3J. R. A. Vera Cruz4T. H. Borromeo5L. E. Endonela6E. B. S. Timog7Institute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, CollegeInstitute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, College‘Biasong’ (Citrus micrantha), native to the Southern Philippine Islands, is an important cultivated fruit tree but has no published plastome sequence. We assembled and characterized the C. micrantha chloroplast genome from accession in the germplasm collection of the Institute of Crop Science, University of the Philippines Los Baños. The complete chloroplast (cp) genome sequence is 159,928-bp long with 128 coding genes comprising 83 mRNA genes, 37 tRNA genes, and eight rRNA genes. Out of the mRNA genes, 45 genes code for photosynthesis, 30 genes code for self-replication, and five genes code for other functions. A phylogenetic analysis of the assembled genome, along with 24 Citrus species and three other Rutaceae species, identified Citrus aurantiifolia as its closest relative with available complete cpDNA sequence.http://dx.doi.org/10.1080/23802359.2022.2144515aurantioideaecpdnacultivated fruit treesmall-flowered papedaplastome assembly |
| spellingShingle | R. E. Madayag R. Jr. P. Gentallan K. J. O. Quiñones M. C. B. Bartolome J. R. A. Vera Cruz T. H. Borromeo L. E. Endonela E. B. S. Timog The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines Mitochondrial DNA. Part B. Resources aurantioideae cpdna cultivated fruit tree small-flowered papeda plastome assembly |
| title | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
| title_full | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
| title_fullStr | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
| title_full_unstemmed | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
| title_short | The complete chloroplast genome of ‘biasong’ (Citrus micrantha Wester), a native species from the Southern Philippines |
| title_sort | complete chloroplast genome of biasong citrus micrantha wester a native species from the southern philippines |
| topic | aurantioideae cpdna cultivated fruit tree small-flowered papeda plastome assembly |
| url | http://dx.doi.org/10.1080/23802359.2022.2144515 |
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