Mutation Profile of Aggressive Pheochromocytoma and Paraganglioma with Comparison of TCGA Data

In pheochromocytoma and paraganglioma (PPGL), germline or somatic mutations in one of the known susceptibility genes are identified in up to 60% patients. However, the peculiar genetic events that drive the aggressive behavior including metastasis in PPGL are poorly understood. We performed targeted...

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Main Authors: Yun Mi Choi, Jinyeong Lim, Min Ji Jeon, Yu-Mi Lee, Tae-Yon Sung, Eun-Gyoung Hong, Ji-Young Lee, Se Jin Jang, Won Gu Kim, Dong Eun Song, Sung-Min Chun
Format: Article
Language:English
Published: MDPI AG 2021-05-01
Series:Cancers
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Online Access:https://www.mdpi.com/2072-6694/13/10/2389
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Summary:In pheochromocytoma and paraganglioma (PPGL), germline or somatic mutations in one of the known susceptibility genes are identified in up to 60% patients. However, the peculiar genetic events that drive the aggressive behavior including metastasis in PPGL are poorly understood. We performed targeted next-generation sequencing analysis to characterize the mutation profile in fifteen aggressive PPGL patients and compared accessible data of aggressive PPGLs from The Cancer Genome Atlas (TCGA) with findings of our cohort. A total of 115 germline and 34 somatic variants were identified with a median 0.58 per megabase tumor mutation burden in our cohort. The most frequent mutation was <i>SDHB</i> germline mutation (27%) and the second frequent mutations were somatic mutations for <i>SETD2</i>, <i>NF1</i>, and <i>HRAS</i> (13%, respectively). Patients were subtyped into three categories based on the kind of mutated genes: pseudohypoxia (<i>n</i> = 5), kinase (<i>n</i> = 5), and unknown (<i>n</i> = 5) group. In copy number variation analysis, deletion of chromosome arm 1p harboring <i>SDHB</i> gene was the most frequently observed. In our cohort, <i>SDHB</i> mutation and pseudohypoxia subtype were significantly associated with poor overall survival. In conclusion, subtyping of mutation profile can be helpful in aggressive PPGL patients with heterogeneous prognosis to make relevant follow-up plan and achieve proper treatment.
ISSN:2072-6694