Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci
Abstract One hypothesis for the origin of endemic species of tomato on the Galápagos islands postulates a hybridization of Solanum pimpinellifolium and Solanum habrochaites. Solanum galapagense accession LA1141 has purple fruit pigmentation, previously described in green‐fruited wild tomatoes such a...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Wiley
2022-04-01
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| Series: | Plant Direct |
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| Online Access: | https://doi.org/10.1002/pld3.394 |
| _version_ | 1817991585211613184 |
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| author | Sean Fenstemaker Leah Sim Jessica Cooperstone David Francis |
| author_facet | Sean Fenstemaker Leah Sim Jessica Cooperstone David Francis |
| author_sort | Sean Fenstemaker |
| collection | DOAJ |
| description | Abstract One hypothesis for the origin of endemic species of tomato on the Galápagos islands postulates a hybridization of Solanum pimpinellifolium and Solanum habrochaites. Solanum galapagense accession LA1141 has purple fruit pigmentation, previously described in green‐fruited wild tomatoes such as S. habrochaites or Solanum chilense. Characterization of LA1141 derived purple pigmentation provides a test of the hybridization hypothesis. Purple pigmentation was recovered in progenies derived from LA1141, and the anthocyanins malvidin 3(coumaroyl)rutinoside‐5‐glucoside, petunidin 3‐(coumaroyl) rutinoside‐5‐glucoside, and petunidin 3‐(caffeoyl)rutinoside‐5‐glucoside were abundant. Fruit color was evaluated in an introgression population, and three quantitative trait loci (QTLs) were mapped and validated in subsequent populations. The loci atroviolacium on chromosome 7, Anthocyanin fruit on chromosome 10, and uniform ripening also on chromosome 10 underly these QTLs. Sequence analysis suggested that the LA1141 alleles of Aft and atv are unique relative to those previously described from S. chilense accession LA0458 and Solanum cheesmaniae accession LA0434, respectively. Phylogenetic analysis of the LA1141 Aft genomic sequence did not support a green‐fruited origin, and the locus clustered with members of the red‐fruited tomato clade. The LA1141 allele of Aft is not the result of an ancient introgression from the green‐fruited clade and underlies a gain of anthocyanin pigmentation in the red‐fruited clade. |
| first_indexed | 2024-04-14T01:15:15Z |
| format | Article |
| id | doaj.art-b98aa80213d0438d9652cea32e0d84be |
| institution | Directory Open Access Journal |
| issn | 2475-4455 |
| language | English |
| last_indexed | 2024-04-14T01:15:15Z |
| publishDate | 2022-04-01 |
| publisher | Wiley |
| record_format | Article |
| series | Plant Direct |
| spelling | doaj.art-b98aa80213d0438d9652cea32e0d84be2022-12-22T02:20:54ZengWileyPlant Direct2475-44552022-04-0164n/an/a10.1002/pld3.394Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium lociSean Fenstemaker0Leah Sim1Jessica Cooperstone2David Francis3Department of Horticulture and Crop Science The Ohio State University Wooster Ohio USADepartment of Horticulture and Crop Science The Ohio State University Wooster Ohio USADepartment of Food Science and Technology The Ohio State University Columbus Ohio USADepartment of Horticulture and Crop Science The Ohio State University Wooster Ohio USAAbstract One hypothesis for the origin of endemic species of tomato on the Galápagos islands postulates a hybridization of Solanum pimpinellifolium and Solanum habrochaites. Solanum galapagense accession LA1141 has purple fruit pigmentation, previously described in green‐fruited wild tomatoes such as S. habrochaites or Solanum chilense. Characterization of LA1141 derived purple pigmentation provides a test of the hybridization hypothesis. Purple pigmentation was recovered in progenies derived from LA1141, and the anthocyanins malvidin 3(coumaroyl)rutinoside‐5‐glucoside, petunidin 3‐(coumaroyl) rutinoside‐5‐glucoside, and petunidin 3‐(caffeoyl)rutinoside‐5‐glucoside were abundant. Fruit color was evaluated in an introgression population, and three quantitative trait loci (QTLs) were mapped and validated in subsequent populations. The loci atroviolacium on chromosome 7, Anthocyanin fruit on chromosome 10, and uniform ripening also on chromosome 10 underly these QTLs. Sequence analysis suggested that the LA1141 alleles of Aft and atv are unique relative to those previously described from S. chilense accession LA0458 and Solanum cheesmaniae accession LA0434, respectively. Phylogenetic analysis of the LA1141 Aft genomic sequence did not support a green‐fruited origin, and the locus clustered with members of the red‐fruited tomato clade. The LA1141 allele of Aft is not the result of an ancient introgression from the green‐fruited clade and underlies a gain of anthocyanin pigmentation in the red‐fruited clade.https://doi.org/10.1002/pld3.394anthocyanin fruitatroviolaciumGalápagos Islandsinbred backcross (IBC)LA1141phylogenetics |
| spellingShingle | Sean Fenstemaker Leah Sim Jessica Cooperstone David Francis Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci Plant Direct anthocyanin fruit atroviolacium Galápagos Islands inbred backcross (IBC) LA1141 phylogenetics |
| title | Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci |
| title_full | Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci |
| title_fullStr | Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci |
| title_full_unstemmed | Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci |
| title_short | Solanum galapagense‐derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci |
| title_sort | solanum galapagense derived purple tomato fruit color is conferred by novel alleles of the anthocyanin fruit and atroviolacium loci |
| topic | anthocyanin fruit atroviolacium Galápagos Islands inbred backcross (IBC) LA1141 phylogenetics |
| url | https://doi.org/10.1002/pld3.394 |
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