Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.

Subarachnoid hemorrhage (SAH) is a fatal stroke caused by bleeding in the brain. SAH can be caused by a ruptured aneurysm or head injury. One-third of patients will survive and recover. One-third will survive with disability; one-third will die. The focus of treatment is to stop bleeding, restore no...

Full description

Bibliographic Details
Main Authors: Pengcheng Zhao, Shaonian Xu, Zhenshan Huang, Pengcheng Deng, Yongming Zhang
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2021-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0253219
_version_ 1818460567073980416
author Pengcheng Zhao
Shaonian Xu
Zhenshan Huang
Pengcheng Deng
Yongming Zhang
author_facet Pengcheng Zhao
Shaonian Xu
Zhenshan Huang
Pengcheng Deng
Yongming Zhang
author_sort Pengcheng Zhao
collection DOAJ
description Subarachnoid hemorrhage (SAH) is a fatal stroke caused by bleeding in the brain. SAH can be caused by a ruptured aneurysm or head injury. One-third of patients will survive and recover. One-third will survive with disability; one-third will die. The focus of treatment is to stop bleeding, restore normal blood flow, and prevent vasospasm. Treatment for SAH varies, depending on the bleeding's underlying cause and the extent of damage to the brain. Treatment may include lifesaving measures, symptom relief, repair of the bleeding vessel, and complication prevention. However, the useful diagnostic biomarkers of SAH are still limited due to the instability of gene marker expression. To overcome this limitation, we developed a new protocol pairing genes and screened significant gene pairs based on the feature selection algorithm. A classifier was constructed with the selected gene pairs and achieved a high performance.
first_indexed 2024-12-14T23:32:18Z
format Article
id doaj.art-ba07e5a3fb234db6b0b99f5df507a34d
institution Directory Open Access Journal
issn 1932-6203
language English
last_indexed 2024-12-14T23:32:18Z
publishDate 2021-01-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS ONE
spelling doaj.art-ba07e5a3fb234db6b0b99f5df507a34d2022-12-21T22:43:41ZengPublic Library of Science (PLoS)PLoS ONE1932-62032021-01-01166e025321910.1371/journal.pone.0253219Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.Pengcheng ZhaoShaonian XuZhenshan HuangPengcheng DengYongming ZhangSubarachnoid hemorrhage (SAH) is a fatal stroke caused by bleeding in the brain. SAH can be caused by a ruptured aneurysm or head injury. One-third of patients will survive and recover. One-third will survive with disability; one-third will die. The focus of treatment is to stop bleeding, restore normal blood flow, and prevent vasospasm. Treatment for SAH varies, depending on the bleeding's underlying cause and the extent of damage to the brain. Treatment may include lifesaving measures, symptom relief, repair of the bleeding vessel, and complication prevention. However, the useful diagnostic biomarkers of SAH are still limited due to the instability of gene marker expression. To overcome this limitation, we developed a new protocol pairing genes and screened significant gene pairs based on the feature selection algorithm. A classifier was constructed with the selected gene pairs and achieved a high performance.https://doi.org/10.1371/journal.pone.0253219
spellingShingle Pengcheng Zhao
Shaonian Xu
Zhenshan Huang
Pengcheng Deng
Yongming Zhang
Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.
PLoS ONE
title Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.
title_full Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.
title_fullStr Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.
title_full_unstemmed Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.
title_short Identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm.
title_sort identify specific gene pairs for subarachnoid hemorrhage based on wavelet analysis and genetic algorithm
url https://doi.org/10.1371/journal.pone.0253219
work_keys_str_mv AT pengchengzhao identifyspecificgenepairsforsubarachnoidhemorrhagebasedonwaveletanalysisandgeneticalgorithm
AT shaonianxu identifyspecificgenepairsforsubarachnoidhemorrhagebasedonwaveletanalysisandgeneticalgorithm
AT zhenshanhuang identifyspecificgenepairsforsubarachnoidhemorrhagebasedonwaveletanalysisandgeneticalgorithm
AT pengchengdeng identifyspecificgenepairsforsubarachnoidhemorrhagebasedonwaveletanalysisandgeneticalgorithm
AT yongmingzhang identifyspecificgenepairsforsubarachnoidhemorrhagebasedonwaveletanalysisandgeneticalgorithm