Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus
ABSTRACT Cryptococcosis is a major fungal disease caused by members of the Cryptococcus gattii and Cryptococcus neoformans species complexes. After more than 15 years of molecular genetic and phenotypic studies and much debate, a proposal for a taxonomic revision was made. The two varieties within C...
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| Format: | Article |
| Language: | English |
| Published: |
American Society for Microbiology
2017-08-01
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| Series: | mSphere |
| Subjects: | |
| Online Access: | https://journals.asm.org/doi/10.1128/mSphere.00238-17 |
| _version_ | 1818990169174310912 |
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| author | Ferry Hagen H. Thorsten Lumbsch Valentina Arsic Arsenijevic Hamid Badali Sebastien Bertout R. Blake Billmyre M. Rosa Bragulat F. Javier Cabañes Mauricio Carbia Arunaloke Chakrabarti Sudha Chaturvedi Vishnu Chaturvedi Min Chen Anuradha Chowdhary Maria-Francisca Colom Oliver A. Cornely Pedro W. Crous Maria S. Cuétara Mara R. Diaz Ana Espinel-Ingroff Hamed Fakhim Rama Falk Wenjie Fang Patricia F. Herkert Consuelo Ferrer Rodríguez James A. Fraser Josepa Gené Josep Guarro Alexander Idnurm María-Teresa Illnait-Zaragozi Ziauddin Khan Kantarawee Khayhan Anna Kolecka Cletus P. Kurtzman Katrien Lagrou Wanqing Liao Carlos Linares Jacques F. Meis Kirsten Nielsen Tinashe K. Nyazika Weihua Pan Marina Pekmezovic Itzhack Polacheck Brunella Posteraro Flavio de Queiroz Telles Orazio Romeo Manuel Sánchez Ana Sampaio Maurizio Sanguinetti Pojana Sriburee Takashi Sugita Saad J. Taj-Aldeen Masako Takashima John W. Taylor Bart Theelen Rok Tomazin Paul E. Verweij Retno Wahyuningsih Ping Wang Teun Boekhout |
| author_facet | Ferry Hagen H. Thorsten Lumbsch Valentina Arsic Arsenijevic Hamid Badali Sebastien Bertout R. Blake Billmyre M. Rosa Bragulat F. Javier Cabañes Mauricio Carbia Arunaloke Chakrabarti Sudha Chaturvedi Vishnu Chaturvedi Min Chen Anuradha Chowdhary Maria-Francisca Colom Oliver A. Cornely Pedro W. Crous Maria S. Cuétara Mara R. Diaz Ana Espinel-Ingroff Hamed Fakhim Rama Falk Wenjie Fang Patricia F. Herkert Consuelo Ferrer Rodríguez James A. Fraser Josepa Gené Josep Guarro Alexander Idnurm María-Teresa Illnait-Zaragozi Ziauddin Khan Kantarawee Khayhan Anna Kolecka Cletus P. Kurtzman Katrien Lagrou Wanqing Liao Carlos Linares Jacques F. Meis Kirsten Nielsen Tinashe K. Nyazika Weihua Pan Marina Pekmezovic Itzhack Polacheck Brunella Posteraro Flavio de Queiroz Telles Orazio Romeo Manuel Sánchez Ana Sampaio Maurizio Sanguinetti Pojana Sriburee Takashi Sugita Saad J. Taj-Aldeen Masako Takashima John W. Taylor Bart Theelen Rok Tomazin Paul E. Verweij Retno Wahyuningsih Ping Wang Teun Boekhout |
| author_sort | Ferry Hagen |
| collection | DOAJ |
| description | ABSTRACT Cryptococcosis is a major fungal disease caused by members of the Cryptococcus gattii and Cryptococcus neoformans species complexes. After more than 15 years of molecular genetic and phenotypic studies and much debate, a proposal for a taxonomic revision was made. The two varieties within C. neoformans were raised to species level, and the same was done for five genotypes within C. gattii. In a recent perspective (K. J. Kwon-Chung et al., mSphere 2:e00357-16, 2017, https://doi.org/10.1128/mSphere.00357-16 ), it was argued that this taxonomic proposal was premature and without consensus in the community. Although the authors of the perspective recognized the existence of genetic diversity, they preferred the use of the informal nomenclature “C. neoformans species complex” and “C. gattii species complex.” Here we highlight the advantage of recognizing these seven species, as ignoring these species will impede deciphering further biologically and clinically relevant differences between them, which may in turn delay future clinical advances. |
| first_indexed | 2024-12-20T19:50:06Z |
| format | Article |
| id | doaj.art-bae6c97789fb406cb80fb6fae0f23948 |
| institution | Directory Open Access Journal |
| issn | 2379-5042 |
| language | English |
| last_indexed | 2024-12-20T19:50:06Z |
| publishDate | 2017-08-01 |
| publisher | American Society for Microbiology |
| record_format | Article |
| series | mSphere |
| spelling | doaj.art-bae6c97789fb406cb80fb6fae0f239482022-12-21T19:28:20ZengAmerican Society for MicrobiologymSphere2379-50422017-08-012410.1128/mSphere.00238-17Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> GenusFerry Hagen0H. Thorsten Lumbsch1Valentina Arsic Arsenijevic2Hamid Badali3Sebastien Bertout4R. Blake Billmyre5M. Rosa Bragulat6F. Javier Cabañes7Mauricio Carbia8Arunaloke Chakrabarti9Sudha Chaturvedi10Vishnu Chaturvedi11Min Chen12Anuradha Chowdhary13Maria-Francisca Colom14Oliver A. Cornely15Pedro W. Crous16Maria S. Cuétara17Mara R. Diaz18Ana Espinel-Ingroff19Hamed Fakhim20Rama Falk21Wenjie Fang22Patricia F. Herkert23Consuelo Ferrer Rodríguez24James A. Fraser25Josepa Gené26Josep Guarro27Alexander Idnurm28María-Teresa Illnait-Zaragozi29Ziauddin Khan30Kantarawee Khayhan31Anna Kolecka32Cletus P. Kurtzman33Katrien Lagrou34Wanqing Liao35Carlos Linares36Jacques F. Meis37Kirsten Nielsen38Tinashe K. Nyazika39Weihua Pan40Marina Pekmezovic41Itzhack Polacheck42Brunella Posteraro43Flavio de Queiroz Telles44Orazio Romeo45Manuel Sánchez46Ana Sampaio47Maurizio Sanguinetti48Pojana Sriburee49Takashi Sugita50Saad J. Taj-Aldeen51Masako Takashima52John W. Taylor53Bart Theelen54Rok Tomazin55Paul E. Verweij56Retno Wahyuningsih57Ping Wang58Teun Boekhout59Department of Medical Microbiology and Infectious Diseases, Canisius-Wilhelmina Hospital, Nijmegen, The NetherlandsScience & Education, The Field Museum, Chicago, Illinois, USAInstitute of Microbiology and Immunology, Faculty of Medicine, University of Belgrade, Belgrade, SerbiaDepartment of Medical Mycology and Parasitology/Invasive Fungi Research Center (IFRC), Mazandaran University of Medical Sciences, Sari, IranUnité Mixte Internationale Recherches Translationnelles sur l’Infection à VIH et les Maladies Infectieuses, Laboratoire de Parasitologie et Mycologie Médicale, UFR Pharmacie, Université Montpellier, Montpellier, FranceDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, North Carolina, USAVeterinary Mycology Group, Department of Animal Health and Anatomy, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, SpainVeterinary Mycology Group, Department of Animal Health and Anatomy, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, SpainDepartamento de Parasitología y Micología, Instituto de Higiene, Facultad de Medicina, Universidad de la República, Montevideo, UruguayDepartment of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, IndiaMycology Laboratory, Wadsworth Center, New York State Department of Health, Albany, New York, USAMycology Laboratory, Wadsworth Center, New York State Department of Health, Albany, New York, USAShanghai Key Laboratory of Molecular Medical Mycology, Shanghai Institute of Medical Mycology, Second Military Medical University, Shanghai, ChinaDepartment of Medical Mycology, Vallabhbhai Patel Chest Institute, University of Delhi, Delhi, IndiaMedical School, Universidad Miguel Hernández, Alicante, SpainCECAD Cluster of Excellence, University of Cologne, Cologne, GermanyPhytopathology Research, Westerdijk Fungal Biodiversity Institute, Utrecht, The NetherlandsDepartment of Microbiology, Hospital Severo Ochoa, Madrid, SpainUniversity of Miami, NSF NIEHS Oceans and Human Health Center, Miami, Florida, USAVCU Medical Center, Richmond, Virginia, USADepartment of Medical Parasitology and Mycology/Cellular and Molecular Research Center, Urmia University of Medical Sciences, Urmia, IranDepartment of Clinical Microbiology and Infectious Diseases, Hadassah-Hebrew University Medical Center, Ein Kerem, Jerusalem, IsraelShanghai Key Laboratory of Molecular Medical Mycology, Shanghai Institute of Medical Mycology, Second Military Medical University, Shanghai, ChinaDepartment of Medical Microbiology and Infectious Diseases, Canisius-Wilhelmina Hospital, Nijmegen, The NetherlandsMedical School, Universidad Miguel Hernández, Alicante, SpainAustralian Infectious Diseases Research Centre, School of Chemistry & Molecular Biosciences, University of Queensland, Brisbane, AustraliaUnitat de Micologia, Facultat de Medicina i Ciències de la Salut, IISPV, Universitat Rovira i Virgili, Reus, SpainUnitat de Micologia, Facultat de Medicina i Ciències de la Salut, IISPV, Universitat Rovira i Virgili, Reus, SpainSchool of BioSciences, BioSciences 2, University of Melbourne, Melbourne, AustraliaDepartment of Bacteriology and Mycology, Tropical Medicine Institute Pedro Kouri, Havana, CubaDepartment of Microbiology, Faculty of Medicine, Kuwait University, Safat, KuwaitDepartment of Microbiology and Parasitology, Faculty of Medical Sciences, University of Phayao, Phayao, ThailandYeast Research, Westerdijk Fungal Biodiversity Institute, Utrecht, The NetherlandsMycotoxin Prevention and Applied Microbiology Research Unit, National Center for Agricultural Utilization Research, USDA-ARS, Peoria, Illinois, USADepartment of Laboratory Medicine, University Hospitals Leuven, Leuven, BelgiumShanghai Key Laboratory of Molecular Medical Mycology, Shanghai Institute of Medical Mycology, Second Military Medical University, Shanghai, ChinaMedical School, Universidad Miguel Hernández, Alicante, SpainDepartment of Medical Microbiology and Infectious Diseases, Canisius-Wilhelmina Hospital, Nijmegen, The NetherlandsDepartment of Microbiology and Immunology, University of Minnesota, Minneapolis, Minnesota, USADepartment of Medical Microbiology, College of Health Sciences, University of Zimbabwe, Harare, ZimbabweShanghai Key Laboratory of Molecular Medical Mycology, Shanghai Institute of Medical Mycology, Second Military Medical University, Shanghai, ChinaFaculty of Medicine. University of Belgrade, Belgrade, SerbiaDepartment of Clinical Microbiology and Infectious Diseases, Hadassah-Hebrew University Medical Center, Ein Kerem, Jerusalem, IsraelInstitute of Public Health (Section of Hygiene), Università Cattolica del Sacro Cuore, Fondazione Policlinico Universitario Agostino Gemelli, Rome, ItalyDepartment of Communitarian Health, Hospital de Clínicas, Federal University of Parana, Curitiba, BrazilDepartment of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Messina, ItalyMedical School, Universidad Miguel Hernández, Alicante, SpainCentro de Investigação e de Tecnologias Agro-ambientais e Biológicas (CITAB), Universidade de Trás-os-Montes e Alto Douro (UTAD), Quinta dos Prados, Vila Real, PortugalInstitute of Microbiology, Università Cattolica del Sacro Cuore, Fondazione Policlinico Universitario Agostino Gemelli, Rome, ItalyDepartment of Microbiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, ThailandDepartment of Microbiology, Meiji Pharmaceutical University, Noshio, Kiyose, Tokyo, JapanMycology Unit, Microbiology Division, Department of Laboratory Medicine and Pathology, Hamad Medical Corporation, Doha, QatarJapan Collection of Microorganisms, RIKEN BioResource Center, Koyadai, Tsukuba, Ibaraki, JapanDepartment of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USAYeast Research, Westerdijk Fungal Biodiversity Institute, Utrecht, The NetherlandsInstitute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, SloveniaCentre of Expertise in Mycology Radboudumc/CWZ, Nijmegen, The NetherlandsDepartment of Parasitology, Faculty of Medicine, Universitas Indonesia, Jakarta, IndonesiaDepartment of Microbiology, Immunology and Parasitology, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USAInstitute of Biodiversity and Ecosystems Dynamics (IBED), University of Amsterdam, Amsterdam, The NetherlandsABSTRACT Cryptococcosis is a major fungal disease caused by members of the Cryptococcus gattii and Cryptococcus neoformans species complexes. After more than 15 years of molecular genetic and phenotypic studies and much debate, a proposal for a taxonomic revision was made. The two varieties within C. neoformans were raised to species level, and the same was done for five genotypes within C. gattii. In a recent perspective (K. J. Kwon-Chung et al., mSphere 2:e00357-16, 2017, https://doi.org/10.1128/mSphere.00357-16 ), it was argued that this taxonomic proposal was premature and without consensus in the community. Although the authors of the perspective recognized the existence of genetic diversity, they preferred the use of the informal nomenclature “C. neoformans species complex” and “C. gattii species complex.” Here we highlight the advantage of recognizing these seven species, as ignoring these species will impede deciphering further biologically and clinically relevant differences between them, which may in turn delay future clinical advances.https://journals.asm.org/doi/10.1128/mSphere.00238-17Cryptococcuscryptococcosisdiagnosticsspecies delimitationtaxonomy |
| spellingShingle | Ferry Hagen H. Thorsten Lumbsch Valentina Arsic Arsenijevic Hamid Badali Sebastien Bertout R. Blake Billmyre M. Rosa Bragulat F. Javier Cabañes Mauricio Carbia Arunaloke Chakrabarti Sudha Chaturvedi Vishnu Chaturvedi Min Chen Anuradha Chowdhary Maria-Francisca Colom Oliver A. Cornely Pedro W. Crous Maria S. Cuétara Mara R. Diaz Ana Espinel-Ingroff Hamed Fakhim Rama Falk Wenjie Fang Patricia F. Herkert Consuelo Ferrer Rodríguez James A. Fraser Josepa Gené Josep Guarro Alexander Idnurm María-Teresa Illnait-Zaragozi Ziauddin Khan Kantarawee Khayhan Anna Kolecka Cletus P. Kurtzman Katrien Lagrou Wanqing Liao Carlos Linares Jacques F. Meis Kirsten Nielsen Tinashe K. Nyazika Weihua Pan Marina Pekmezovic Itzhack Polacheck Brunella Posteraro Flavio de Queiroz Telles Orazio Romeo Manuel Sánchez Ana Sampaio Maurizio Sanguinetti Pojana Sriburee Takashi Sugita Saad J. Taj-Aldeen Masako Takashima John W. Taylor Bart Theelen Rok Tomazin Paul E. Verweij Retno Wahyuningsih Ping Wang Teun Boekhout Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus mSphere Cryptococcus cryptococcosis diagnostics species delimitation taxonomy |
| title | Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus |
| title_full | Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus |
| title_fullStr | Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus |
| title_full_unstemmed | Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus |
| title_short | Importance of Resolving Fungal Nomenclature: the Case of Multiple Pathogenic Species in the <italic toggle="yes">Cryptococcus</italic> Genus |
| title_sort | importance of resolving fungal nomenclature the case of multiple pathogenic species in the italic toggle yes cryptococcus italic genus |
| topic | Cryptococcus cryptococcosis diagnostics species delimitation taxonomy |
| url | https://journals.asm.org/doi/10.1128/mSphere.00238-17 |
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