The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae)
The complete chloroplast genome of Mitrasacme pygmaea was sequenced and assembled for the first time. The chloroplast genome is 152,611 bp in length, containing a large single-copy (LSC) region of 83,881 bp and a small single-copy region (SSC) of 18,110 bp, separated by a pair of inverted repeats (I...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1772686 |
| _version_ | 1827772869537431552 |
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| author | Xiaolang Du Lan Cao Guoyue Zhong Zejing Mu |
| author_facet | Xiaolang Du Lan Cao Guoyue Zhong Zejing Mu |
| author_sort | Xiaolang Du |
| collection | DOAJ |
| description | The complete chloroplast genome of Mitrasacme pygmaea was sequenced and assembled for the first time. The chloroplast genome is 152,611 bp in length, containing a large single-copy (LSC) region of 83,881 bp and a small single-copy region (SSC) of 18,110 bp, separated by a pair of inverted repeats (IRs) of 25,310 bp. The genome contains 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Among them, 15 genes have one intron each and 3 genes contain two introns. The overall GC content is 37.9%, while the corresponding values of LSC, SSC, and IR regions are 36.0%, 31.7%, and 43.4%, respectively. Phylogenetic analysis showed that M. pygmaea is sister to Gentiana tibetica and provided new insight into the evolution of Loganiaceae. |
| first_indexed | 2024-03-11T13:14:01Z |
| format | Article |
| id | doaj.art-bb37b4f30078498fbe98cbf1b672cf4e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:01Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-bb37b4f30078498fbe98cbf1b672cf4e2023-11-03T13:50:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532406240710.1080/23802359.2020.17726861772686The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae)Xiaolang Du0Lan Cao1Guoyue Zhong2Zejing Mu3Research Center for Traditional Chinese Medicine Resources and Ethnic Minority Medicine, Jiangxi university of Traditional Chinese MedicineResearch Center for Traditional Chinese Medicine Resources and Ethnic Minority Medicine, Jiangxi university of Traditional Chinese MedicineResearch Center for Traditional Chinese Medicine Resources and Ethnic Minority Medicine, Jiangxi university of Traditional Chinese MedicineResearch Center for Traditional Chinese Medicine Resources and Ethnic Minority Medicine, Jiangxi university of Traditional Chinese MedicineThe complete chloroplast genome of Mitrasacme pygmaea was sequenced and assembled for the first time. The chloroplast genome is 152,611 bp in length, containing a large single-copy (LSC) region of 83,881 bp and a small single-copy region (SSC) of 18,110 bp, separated by a pair of inverted repeats (IRs) of 25,310 bp. The genome contains 113 unique genes, including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Among them, 15 genes have one intron each and 3 genes contain two introns. The overall GC content is 37.9%, while the corresponding values of LSC, SSC, and IR regions are 36.0%, 31.7%, and 43.4%, respectively. Phylogenetic analysis showed that M. pygmaea is sister to Gentiana tibetica and provided new insight into the evolution of Loganiaceae.http://dx.doi.org/10.1080/23802359.2020.1772686complete chloroplast genomemitrasacme pygmaealoganiaceae |
| spellingShingle | Xiaolang Du Lan Cao Guoyue Zhong Zejing Mu The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae) Mitochondrial DNA. Part B. Resources complete chloroplast genome mitrasacme pygmaea loganiaceae |
| title | The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae) |
| title_full | The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae) |
| title_fullStr | The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae) |
| title_full_unstemmed | The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae) |
| title_short | The complete chloroplast genome of Mitrasacme pygmaea (Loganiaceae) |
| title_sort | complete chloroplast genome of mitrasacme pygmaea loganiaceae |
| topic | complete chloroplast genome mitrasacme pygmaea loganiaceae |
| url | http://dx.doi.org/10.1080/23802359.2020.1772686 |
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