ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.

The DNA uptake of naturally competent bacteria has been attributed to the action of DNA uptake machineries resembling type IV pilus complexes. However, the protein(s) for pulling the DNA across the outer membrane of Gram-negative bacteria remain speculative. Here we show that the competence protein...

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Main Authors: Patrick Seitz, Hassan Pezeshgi Modarres, Sandrine Borgeaud, Roman D Bulushev, Lorenz J Steinbock, Aleksandra Radenovic, Matteo Dal Peraro, Melanie Blokesch
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2014-01-01
Series:PLoS Genetics
Online Access:http://europepmc.org/articles/PMC3879209?pdf=render
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author Patrick Seitz
Hassan Pezeshgi Modarres
Sandrine Borgeaud
Roman D Bulushev
Lorenz J Steinbock
Aleksandra Radenovic
Matteo Dal Peraro
Melanie Blokesch
author_facet Patrick Seitz
Hassan Pezeshgi Modarres
Sandrine Borgeaud
Roman D Bulushev
Lorenz J Steinbock
Aleksandra Radenovic
Matteo Dal Peraro
Melanie Blokesch
author_sort Patrick Seitz
collection DOAJ
description The DNA uptake of naturally competent bacteria has been attributed to the action of DNA uptake machineries resembling type IV pilus complexes. However, the protein(s) for pulling the DNA across the outer membrane of Gram-negative bacteria remain speculative. Here we show that the competence protein ComEA binds incoming DNA in the periplasm of naturally competent Vibrio cholerae cells thereby promoting DNA uptake, possibly through ratcheting and entropic forces associated with ComEA binding. Using comparative modeling and molecular simulations, we projected the 3D structure and DNA-binding site of ComEA. These in silico predictions, combined with in vivo and in vitro validations of wild-type and site-directed modified variants of ComEA, suggested that ComEA is not solely a DNA receptor protein but plays a direct role in the DNA uptake process. Furthermore, we uncovered that ComEA homologs of other bacteria (both Gram-positive and Gram-negative) efficiently compensated for the absence of ComEA in V. cholerae, suggesting that the contribution of ComEA in the DNA uptake process might be conserved among naturally competent bacteria.
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spelling doaj.art-bccbebfd6d0e431084350bb5b1452c3e2022-12-22T01:01:18ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042014-01-01101e100406610.1371/journal.pgen.1004066ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.Patrick SeitzHassan Pezeshgi ModarresSandrine BorgeaudRoman D BulushevLorenz J SteinbockAleksandra RadenovicMatteo Dal PeraroMelanie BlokeschThe DNA uptake of naturally competent bacteria has been attributed to the action of DNA uptake machineries resembling type IV pilus complexes. However, the protein(s) for pulling the DNA across the outer membrane of Gram-negative bacteria remain speculative. Here we show that the competence protein ComEA binds incoming DNA in the periplasm of naturally competent Vibrio cholerae cells thereby promoting DNA uptake, possibly through ratcheting and entropic forces associated with ComEA binding. Using comparative modeling and molecular simulations, we projected the 3D structure and DNA-binding site of ComEA. These in silico predictions, combined with in vivo and in vitro validations of wild-type and site-directed modified variants of ComEA, suggested that ComEA is not solely a DNA receptor protein but plays a direct role in the DNA uptake process. Furthermore, we uncovered that ComEA homologs of other bacteria (both Gram-positive and Gram-negative) efficiently compensated for the absence of ComEA in V. cholerae, suggesting that the contribution of ComEA in the DNA uptake process might be conserved among naturally competent bacteria.http://europepmc.org/articles/PMC3879209?pdf=render
spellingShingle Patrick Seitz
Hassan Pezeshgi Modarres
Sandrine Borgeaud
Roman D Bulushev
Lorenz J Steinbock
Aleksandra Radenovic
Matteo Dal Peraro
Melanie Blokesch
ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.
PLoS Genetics
title ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.
title_full ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.
title_fullStr ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.
title_full_unstemmed ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.
title_short ComEA is essential for the transfer of external DNA into the periplasm in naturally transformable Vibrio cholerae cells.
title_sort comea is essential for the transfer of external dna into the periplasm in naturally transformable vibrio cholerae cells
url http://europepmc.org/articles/PMC3879209?pdf=render
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