Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates
This data article describes the whole-genome sequencing and in vitro activity data of Escherichia phage NTEC3 isolated from a community sewage sample in Chandigarh, India. The phage NTEC3 was active against multi-drug-resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming Uropathogenic...
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| Format: | Article |
| Language: | English |
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Elsevier
2022-08-01
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| Series: | Data in Brief |
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| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340922006734 |
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| author | Naveen Chaudhary Dharminder Singh Ravi Kumar Maurya Balvinder Mohan Ravimohan S. Mavuduru Neelam Taneja |
| author_facet | Naveen Chaudhary Dharminder Singh Ravi Kumar Maurya Balvinder Mohan Ravimohan S. Mavuduru Neelam Taneja |
| author_sort | Naveen Chaudhary |
| collection | DOAJ |
| description | This data article describes the whole-genome sequencing and in vitro activity data of Escherichia phage NTEC3 isolated from a community sewage sample in Chandigarh, India. The phage NTEC3 was active against multi-drug-resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming Uropathogenic Escherichia coli (UPEC) strains. The genome of this phage was linear, double-stranded, and 44.2 kb long in size. A total of 72 ORFs (open reading frames) were predicted and 30 ORFs were encoded for functional proteins. The phage belonged to the Kagunavirus genus of the Siphoviridae family. Phylogenetic analysis using DNA polymerase was performed to understand the phage evolutionary relationships. Genes encoding for lysogeny, virulence, toxins, antibiotic resistance, and the CRISPR/CRISPR-like system were not found during screening. The annotated genome was deposited in Genbank under the accession number OK539620. |
| first_indexed | 2024-04-13T18:21:55Z |
| format | Article |
| id | doaj.art-bcd99124608c4e63bf12a379f0b46a99 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-04-13T18:21:55Z |
| publishDate | 2022-08-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-bcd99124608c4e63bf12a379f0b46a992022-12-22T02:35:25ZengElsevierData in Brief2352-34092022-08-0143108479Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolatesNaveen Chaudhary0Dharminder Singh1Ravi Kumar Maurya2Balvinder Mohan3Ravimohan S. Mavuduru4Neelam Taneja5Department of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, IndiaDepartment of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, IndiaDepartment of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, IndiaDepartment of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, IndiaUrology, Postgraduate Institute of Medical Education and Research, Chandigarh, IndiaDepartment of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, India; Corresponding author.This data article describes the whole-genome sequencing and in vitro activity data of Escherichia phage NTEC3 isolated from a community sewage sample in Chandigarh, India. The phage NTEC3 was active against multi-drug-resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming Uropathogenic Escherichia coli (UPEC) strains. The genome of this phage was linear, double-stranded, and 44.2 kb long in size. A total of 72 ORFs (open reading frames) were predicted and 30 ORFs were encoded for functional proteins. The phage belonged to the Kagunavirus genus of the Siphoviridae family. Phylogenetic analysis using DNA polymerase was performed to understand the phage evolutionary relationships. Genes encoding for lysogeny, virulence, toxins, antibiotic resistance, and the CRISPR/CRISPR-like system were not found during screening. The annotated genome was deposited in Genbank under the accession number OK539620.http://www.sciencedirect.com/science/article/pii/S2352340922006734PhageMultidrug-resistantUropathogenic Escherichia coliUrinary tract infectionsSequencingBiofilms |
| spellingShingle | Naveen Chaudhary Dharminder Singh Ravi Kumar Maurya Balvinder Mohan Ravimohan S. Mavuduru Neelam Taneja Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates Data in Brief Phage Multidrug-resistant Uropathogenic Escherichia coli Urinary tract infections Sequencing Biofilms |
| title | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
| title_full | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
| title_fullStr | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
| title_full_unstemmed | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
| title_short | Whole genome sequencing and in vitro activity data of Escherichia phage NTEC3 against multidrug-resistant Uropathogenic and extensively drug-resistant Uropathogenic E. coli isolates |
| title_sort | whole genome sequencing and in vitro activity data of escherichia phage ntec3 against multidrug resistant uropathogenic and extensively drug resistant uropathogenic e coli isolates |
| topic | Phage Multidrug-resistant Uropathogenic Escherichia coli Urinary tract infections Sequencing Biofilms |
| url | http://www.sciencedirect.com/science/article/pii/S2352340922006734 |
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