Software for processing of data of whole-genome sequence analysis of microorganisms

Software for processing of data of whole-genome sequence analysis of microorganisms

The article presents the brief review of the current software developed for data analysis of microorganisms’ whole genomes.

Bibliographic Details
Main Authors:	M. V. Sprindzhuk, R. C. Sergeev, Yu. E. Demidchik, O. M. Zalutskaya, A. E. Skryagin, A. M. Skryagina
Format:	Article
Language:	Russian
Published:	New Terra Publishing House 2016-02-01
Series:	Туберкулез и болезни лёгких
Subjects:	полногеномное секвенирование биоинформатика
Online Access:	https://www.tibl-journal.com/jour/article/view/851

Similar Items

Comparative analysis of genome-wide sequences of the seed lot of the vaccine strain of Mycobacterium bovis BCG-1 (Russia) and daughter isolates obtained from children with BCG osteitis
by: O. V. Narvskaya, et al.
Published: (2021-05-01)

Profiling Human Coronavirus Genomic Data Obtained from Patients in Belarus
by: M. V. Sprindzuk, et al.
Published: (2022-11-01)

The Emergence of a Ciprofloxacin-Resistant Non-Groupable Neisseria meningitidis Strain of the Clonal Complex ST-175 in the Russian Federation
by: M. A. Koroleva, et al.
Published: (2021-09-01)

Машинное обучение в задачах base-calling для методов секвенирования нового поколения
by: Andrew Borodinov, et al.
Published: (2022-05-01)

FEATURES OF THE INTESTINAL MICROBIOTA IN PATIENTS WITH CHRONIC OBSTRUCTIVE PULMONARY DISEASE
by: L. M. Ogorodova, et al.
Published: (2014-10-01)

Analysis of the Features of the Genomic Organization of Plague Microbe Strains Suitable for the Creation of a New Attenuated Vaccine
by: A. V. Grigorievykh, et al.
Published: (2022-11-01)

Analysis of whole genome sequence of strain "0" of avian infectious laryngotracheitis virus
by: A. A. Kozlov, et al.
Published: (2018-04-01)

Analysis of the Genome Wide Sequence of Yersinia pestis strains Based on the Consecutive 680-SNP Algorithm
by: G. N. Odinokov, et al.
Published: (2013-09-01)

Miyoshi myopathy: diagnosis of a familial case of dysferlinopathy
by: V. P. Fedotov, et al.
Published: (2016-03-01)

Modern transcriptome data processing algorithms: a review of methods and results of approbation
by: M. V. Sprindzuk, et al.
Published: (2021-08-01)

GENOMIC ABERRATIONS IN DNA OF AFRICAN SWINE FEVER VIRUS CIRCULATING IN THE TERRITORY OF THE RUSSIAN FEDERATION
by: A. A. Varentsova, et al.
Published: (2018-04-01)

Molecular Mechanisms of Action of Undenatured Type II Collagen: Experimental and Clinical Evidence
by: O. A. Gromova, et al.
Published: (2022-10-01)

Modern Tanscriptome Data Rrocessing Algorithms: a Review of Methods and Results of Approbation
by: M. V. Sprindzuk, et al.
Published: (2021-04-01)

Genomic technologies in neonatology
by: L. N. Chernova, et al.
Published: (2017-11-01)

Сhallenging Questions of Development and Application of DNA Banks for the Purposes of Criminology and Related Disciplines
by: M. V. Sprindzuk, et al.
Published: (2019-05-01)

Population-based biobank for analyzing the frequencies of clinically relevant DNA markers in the Russian population: bioinformatic aspects
by: I. O. Gorin, et al.
Published: (2020-12-01)

NEW SOFTWARE FOR PROCESSING DATA OF ENTIRE GENOME OF MYCOBACTERIUM TUBERCULOSIS
by: M. V. Sprindzhuk, et al.
Published: (2017-06-01)

Integrated approaches in diagnostics and therapy of allergic diseases
by: S V Guryanova
Published: (2018-12-01)

Modern Methods of DNA Sequencing (Scientific Review)
by: Ya. M. Krasnov, et al.
Published: (2014-06-01)

ABOUT COMMON AND THEORETICAL INFORMATICS
by: Andrey A. Mayorov, et al.
Published: (2016-05-01)

The role of microbiome in the pathogenesis of immune-mediated inflammatory diseases: controversial issues
by: A. M. Lila, et al.
Published: (2021-02-01)

DIFFERENTIAL DIAGNOSIS OF HEREDITARY SYNDROME OF HYPOCHOLESTEROLEMIA BY USING EXOMIC SEQUENCING
by: A. I. Yershova, et al.
Published: (2015-09-01)

Применение алгоритмов биоинформатики для обнаружения мутирующих кибератак
by: Dmitry Zegzhda, et al.
Published: (2021-08-01)

Application of pso for solving problems of invariant comparison of two-dimensional closed curve
by: Dmitry Borisovich Abramov, et al.
Published: (2017-08-01)

CОВРЕМЕННЫЕ АЛГОРИТМЫ ОБРАБОТКИ ДАННЫХ ТРАНСКРИПТОМОВ: ОБЗОР МЕТОДОВ И РЕЗУЛЬТАТЫ АПРОБАЦИИ
Published: (2021-04-01)

PHARMACOGENETIC TESTING OPPORTUNITIES IN CARDIOLOGY BASED ON EXOME SEQUENCING
by: N. V. Shcherbakova, et al.
Published: (2015-09-01)

High-performance DNA sequencing to identify genetically determined diseases in pediatric practice
by: V. Yu. Voinova, et al.
Published: (2019-03-01)

Direct and indirect methods of determining DNA nucleotide sequences in microorganisms
by: R. A. Volkova, et al.
Published: (2018-02-01)

DNMT3A GENE POINT MUTATIONS DETECTION IN ACUTE MYELOID LEUKEMIA PATIENTS USING SEQUENCING TECHNIQUE
by: A. V. Vinogradov, et al.
Published: (2015-02-01)

Tissue-specific features of mitochondrial DNA polymorphisms
by: N. A. Litvinova, et al.
Published: (2016-03-01)

High-performance sequencing in the diagnosis of monogenic diseases: Possibilities and limitations
by: L. I. Shagam, et al.
Published: (2016-04-01)

Genetic features of cancer of unknown primary
by: A. A. Schegoleva, et al.
Published: (2023-01-01)

The spectrum of BRCA1 gene mutations in early onset breast cancer patients from Russia
by: M. S. Anisimenko, et al.
Published: (2018-09-01)

Clinical and genetic characteristics of the early 66th type epileptic encephalopathy (literature review and own observation)
by: T. V. Markova, et al.
Published: (2020-06-01)

Monitoring Methicillin-Resistant Staphylococcus Strains in the Moscow Medical and Surgical Center using Molecular-Biological Methods
by: T. S. Skachkova, et al.
Published: (2021-03-01)

EXOME SEQUENCING AND THE DIAGNOSTICS OF COMPLEX DISEASE PREDISPOSITION IN PREVENTIVE MEDICINE
by: N. V. Shcherbakova, et al.
Published: (2013-12-01)

Characteristics of intestinal microbiota of infants according to data of sequencing of the 16s RRNA gene
by: N. V. Gonchar, et al.
Published: (2017-06-01)

Analysis of Gene Expression Omnibus high-throughput sequencing data for the determination of microribonucleic acids in the blood plasma of patients with glioblastomas
by: A. A. Pushkin, et al.
Published: (2022-03-01)

Aymé–Gripp syndrome in a Russian patient with a newly detected mutation in the MAF gene
by: E. L. Dadali, et al.
Published: (2021-12-01)

Genetic variants of hepatitis B virus in patients with chronic hepatitis B
by: E. A. Elpaeva, et al.
Published: (2015-11-01)