A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions

The role of the human intestinal tract in host–microbe interactions has been highlighted in recent years. Several 3-dimensional (3D) models have been developed to reproduce the physiological characteristics of the human gut and to investigate the function of the gut microbiota. One challenge for 3D...

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Main Authors: Liqin Cheng, Tingting Liu, Qiong Liu, Liming Lian, Guosheng Tang, Luis Santiago Mille, Fabricio Romero García, Lars Engstrand, Yu Shrike Zhang, Juan Du
Format: Article
Language:English
Published: American Association for the Advancement of Science (AAAS) 2023-01-01
Series:Research
Online Access:https://spj.science.org/doi/10.34133/research.0058
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author Liqin Cheng
Tingting Liu
Qiong Liu
Liming Lian
Guosheng Tang
Luis Santiago Mille
Fabricio Romero García
Lars Engstrand
Yu Shrike Zhang
Juan Du
author_facet Liqin Cheng
Tingting Liu
Qiong Liu
Liming Lian
Guosheng Tang
Luis Santiago Mille
Fabricio Romero García
Lars Engstrand
Yu Shrike Zhang
Juan Du
author_sort Liqin Cheng
collection DOAJ
description The role of the human intestinal tract in host–microbe interactions has been highlighted in recent years. Several 3-dimensional (3D) models have been developed to reproduce the physiological characteristics of the human gut and to investigate the function of the gut microbiota. One challenge for 3D models is to recapitulate the low oxygen concentrations in the intestinal lumen. Moreover, most earlier 3D culture systems used a membrane to physically separate bacteria from the intestinal epithelium, which has sometimes made the studies of bacteria adhering to or invading cells less feasible. We report the establishment of a 3D gut epithelium model and cultured it at high cell viability under an anaerobic condition. We further cocultured intestinal bacteria including both commensal and pathogen directly with epithelial cells in the established 3D model under the anaerobic condition. We subsequently compared the gene expression differences of aerobic and anaerobic conditions for cell and bacterial growth via dual RNA sequencing. Our study provides a physiologically relevant 3D gut epithelium model that mimics the anaerobic condition in the intestinal lumen and supplies a powerful system for future in-depth gut–microbe interactional investigations.
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spelling doaj.art-be4181dc054443938e6ae8225d74314d2024-03-03T09:24:09ZengAmerican Association for the Advancement of Science (AAAS)Research2639-52742023-01-01610.34133/research.0058A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host InteractionsLiqin Cheng0Tingting Liu1Qiong LiuLiming Lian2Guosheng Tang3Luis Santiago Mille4Fabricio Romero García5Lars Engstrand6Yu Shrike Zhang7Juan Du8Centre for Translational Microbiome Research (CTMR), Department of Microbiology, Tumor, and Cell Biology, Karolinska Institutet, Stockholm, Sweden.Division of Engineering in Medicine, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, 65 Landsdowne Street, Cambridge, MA 02139, USA.Division of Engineering in Medicine, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, 65 Landsdowne Street, Cambridge, MA 02139, USA.Division of Engineering in Medicine, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, 65 Landsdowne Street, Cambridge, MA 02139, USA.Division of Engineering in Medicine, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, 65 Landsdowne Street, Cambridge, MA 02139, USA.Centre for Translational Microbiome Research (CTMR), Department of Microbiology, Tumor, and Cell Biology, Karolinska Institutet, Stockholm, Sweden.Centre for Translational Microbiome Research (CTMR), Department of Microbiology, Tumor, and Cell Biology, Karolinska Institutet, Stockholm, Sweden.Division of Engineering in Medicine, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, 65 Landsdowne Street, Cambridge, MA 02139, USA.Centre for Translational Microbiome Research (CTMR), Department of Microbiology, Tumor, and Cell Biology, Karolinska Institutet, Stockholm, Sweden.The role of the human intestinal tract in host–microbe interactions has been highlighted in recent years. Several 3-dimensional (3D) models have been developed to reproduce the physiological characteristics of the human gut and to investigate the function of the gut microbiota. One challenge for 3D models is to recapitulate the low oxygen concentrations in the intestinal lumen. Moreover, most earlier 3D culture systems used a membrane to physically separate bacteria from the intestinal epithelium, which has sometimes made the studies of bacteria adhering to or invading cells less feasible. We report the establishment of a 3D gut epithelium model and cultured it at high cell viability under an anaerobic condition. We further cocultured intestinal bacteria including both commensal and pathogen directly with epithelial cells in the established 3D model under the anaerobic condition. We subsequently compared the gene expression differences of aerobic and anaerobic conditions for cell and bacterial growth via dual RNA sequencing. Our study provides a physiologically relevant 3D gut epithelium model that mimics the anaerobic condition in the intestinal lumen and supplies a powerful system for future in-depth gut–microbe interactional investigations.https://spj.science.org/doi/10.34133/research.0058
spellingShingle Liqin Cheng
Tingting Liu
Qiong Liu
Liming Lian
Guosheng Tang
Luis Santiago Mille
Fabricio Romero García
Lars Engstrand
Yu Shrike Zhang
Juan Du
A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions
Research
title A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions
title_full A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions
title_fullStr A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions
title_full_unstemmed A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions
title_short A 3D Bioprinted Gut Anaerobic Model for Studying Bacteria–Host Interactions
title_sort 3d bioprinted gut anaerobic model for studying bacteria host interactions
url https://spj.science.org/doi/10.34133/research.0058
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