Handling of targeted amplicon sequencing data focusing on index hopping and demultiplexing using a nested metabarcoding approach in ecology
Abstract High-throughput sequencing platforms are increasingly being used for targeted amplicon sequencing because they enable cost-effective sequencing of large sample sets. For meaningful interpretation of targeted amplicon sequencing data and comparison between studies, it is critical that bioinf...
Main Authors: | Yasemin Guenay-Greunke, David A. Bohan, Michael Traugott, Corinna Wallinger |
---|---|
Format: | Article |
Language: | English |
Published: |
Nature Portfolio
2021-09-01
|
Series: | Scientific Reports |
Online Access: | https://doi.org/10.1038/s41598-021-98018-4 |
Similar Items
-
Limited detection of secondarily consumed plant food by DNA‐based diet analysis of omnivorous carabid beetles
by: Yasemin Guenay, et al.
Published: (2021-03-01) -
deMULTIplex2: robust sample demultiplexing for scRNA-seq
by: Qin Zhu, et al.
Published: (2024-01-01) -
PacBio amplicon sequencing for metabarcoding of mixed DNA samples from lichen herbarium specimens
by: Cécile Gueidan, et al.
Published: (2019-06-01) -
Simulation of a multicarrier demultiplexer
by: Saginaw, Michael A. (Michael Adlai)
Published: (2008) -
An efficient multirate FDM demultiplexer
by: Xiang, Weiguan
Published: (2009)